RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 IL17RDQ8NFM7 739 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 OR9I1Q8NGQ6 314 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLC26A7Q8TE54 656 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RPL3LQ92901 407 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLC10A4Q96EP9 437 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 IGSF21Q96ID5 467 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF285Q96NJ3 590 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 GBP5Q96PP8 586 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TRNT1Q96Q11 434 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 CHID1Q9BWS9 393 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HDAC8Q9BY41 377 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 YIPF3Q9GZM5 350 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RNF38Q9H0F5 515 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM245Q9H330 911 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 DPEP2Q9H4A9 486 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 CXorf21Q9HAI6 301 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PLEKHA1Q9HB21 404 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PREBQ9HCU5 417 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FBXL12Q9NXK8 326 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 EHD3Q9NZN3 535 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SPATA7Q9P0W8 599 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 UBA2Q9UBT2 640 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HCN2Q9UL51 889 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SAMD4AQ9UPU9 718 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PLEKHA6Q9Y2H5 1048 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FNDC3AQ9Y2H6 1198 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RHBDD3Q9Y3P4 386 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FAM32AQ9Y421 112 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PCDHGB2Q9Y5G2 931 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZFP37Q9Y6Q3 630 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 KRBA1A5PL33 1030 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LRRC14BA6NHZ5 514 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF99A8MXY4 864 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SYT5O00445 386 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ADAM10O14672 748 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CTDSPLO15194 276 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RGS14O43566 566 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CREB3O43889 395 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 KCNH1O95259 989 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PGRP06401 933 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ASGR1P07306 291 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 G6PDP11413 515 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HDCP19113 662 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PRPS1L1P21108 318 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CD52P31358 61 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CCR7P32248 378 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GALNSP34059 522 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DDOSTP39656 456 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CRYBB2P43320 205 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PPP5CP53041 499 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 OSTNP61366 133 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SELENOWP63302 87 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 IGLV3-21P80748 117 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FOXK2Q01167 660 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF45Q02386 682 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 OCA2Q04671 838 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ASAH1Q13510 395 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NRF1Q16656 503 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 VMACQ2NL98 169 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 INAVAQ3KP66 663 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 AGKQ53H12 422 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SPIN4Q56A73 249 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 COL13A1Q5TAT6 717 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 HACD4Q5VWC8 232 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RGMBQ6NW40 437 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FUT10Q6P4F1 479 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ENPP6Q6UWR7 440 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 WASH2PQ6VEQ5 465 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LPCAT2Q7L5N7 544 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CTU1Q7Z7A3 348 aaKnown RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PXKQ7Z7A4 578 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LYSMD2Q8IV50 215 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF687Q8N1G0 1237 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LINC00471Q8N535 108 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TP53I13Q8NBR0 393 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 OR52N2Q8NGI0 321 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 B4GALNT2Q8NHY0 566 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF461Q8TAF7 563 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CREB3L4Q8TEY5 395 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LRRN4Q8WUT4 740 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DEDD2Q8WXF8 326 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GIMAP5Q96F15 307 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 KCNA7Q96RP8 456 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FUNDC2Q9BWH2 189 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CDADC1Q9BWV3 514 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ADGRE3Q9BY15 652 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ALG9Q9H6U8 611 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF334Q9HCZ1 680 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ACSS1Q9NUB1 689 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 NDUFAF4Q9P032 175 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SEPT10Q9P0V9 454 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RABL2AQ9UBK7 228 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GABRQQ9UN88 632 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RABL2BQ9UNT1 228 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GRIP1Q9Y3R0 1128 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CHST2Q9Y4C5 530 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RAI2Q9Y5P3 530 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 A0A0D9SEW6 157 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 A0A1W2PRB8 838 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms