RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CSTF3Q12996 717 aaKnown RBP10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 CCDC6Q16204 474 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 SLC5A12Q1EHB4 618 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 UGT3A2Q3SY77 523 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 ATP6AP1LQ52LC2 224 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 PLA2G2CQ5R387 149 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 VWA5B1Q5TIE3 1220 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 TMIGD1Q6UXZ0 262 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 RNF165Q6ZSG1 346 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 ZNF761Q86XN6 746 aaPredicted RBP10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 SFTPA2Q8IWL1 248 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 SLC35F3Q8IY50 421 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 EID2Q8N6I1 236 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 FAM181AQ8N9Y4 354 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 KYQ8NBH2 561 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 TTLQ8NG68 377 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 ACTRT2Q8TDY3 377 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 NAT6Q93015 286 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 ZUFSPQ96AP4 578 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 MTFMTQ96DP5 389 aaKnown RBP10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 ZDHHC12Q96GR4 267 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 PPP3R2Q96LZ3 170 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 PRAP1Q96NZ9 151 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 LRRC37BQ96QE4 947 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 DPH7Q9BTV6 452 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 WDR55Q9H6Y2 383 aaPredicted RBP10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 NT5DC2Q9H857 520 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 KCNK13Q9HB14 408 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 IL21RQ9HBE5 538 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 TNFRSF12AQ9NP84 129 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 GEMIN8Q9NWZ8 242 aaKnown RBP10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 SPHK1Q9NYA1 384 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 ANKMY1Q9P2S6 941 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 NCDNQ9UBB6 729 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 PCDHGB2Q9Y5G2 931 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 RNF215Q9Y6U7 377 aa10.07□□□□□ -0.8
TMEM55B-205ENST00000554028 A0A0J9YY10 115 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 A0A1B0GTL3 188 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SERTM1A2A2V5 107 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 CPED1A4D0V7 1026 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SDHDO14521 159 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 ZNF195O14628 629 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SIGLEC6O43699 453 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 OR1F1O43749 312 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 DUX1O43812 170 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 PDYNP01213 254 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 ZNF806P0C7X5 589 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 PNLIPP16233 465 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 UGT2B7P16662 529 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 LBPP18428 481 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 CDH3P22223 829 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 PSMB5P28074 263 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 PIK3CBP42338 1070 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 GRK6P43250 576 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 IRX1P78414 480 aaPredicted RBP10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 GPLD1P80108 840 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 MAD2L1Q13257 205 aaPredicted RBP10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 DDX39BQ13838 428 aaKnown RBP10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 E2F2Q14209 437 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 RPS6KA2Q15349 733 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 NR6A1Q15406 480 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SLC9B1Q4ZJI4 515 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SPDYAQ5MJ70 313 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 IRGCQ6NXR0 463 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SPESP1Q6UW49 350 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SCIMPQ6UWF3 145 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 KANSL1Q7Z3B3 1105 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 TRIM46Q7Z4K8 759 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 PLXDC1Q8IUK5 500 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 LAS2Q8IYD9 372 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 OR7G3Q8NG95 312 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 OR4K1Q8NGD4 311 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 NCSTNQ92542 709 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 USP7Q93009 1102 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 APOLD1Q96LR9 279 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 OR2A14Q96R47 310 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 NRTNQ99748 197 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 EBF4Q9BQW3 602 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 CENPKQ9BS16 269 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 KCNH6Q9H252 994 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 BRF2Q9HAW0 419 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 RAPGEFL1Q9UHV5 662 aa10.06□□□□□ -0.8
TMEM55B-205ENST00000554028 CEP192Q8TEP8 1941 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 SPAG17Q6Q759 2223 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 KCNE1BA0A087WTH5 132 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 ATP6AP2A0A1C7CYW4 349 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 TRBC2A0A5B9 178 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 FOXE1O00358 373 aaPredicted RBP10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 TRIM38O00635 465 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 UBDO15205 165 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 FLRT2O43155 660 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 PRAMEF4O60810 478 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 LRP3O75074 770 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 PEX11AO75192 247 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 ATP6AP2O75787 350 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 MYO1DO94832 1006 aa10.05□□□□□ -0.8
TMEM55B-205ENST00000554028 LMNAP02545 664 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms