RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SMU1Q2TAY7 513 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 KBTBD12Q3ZCT8 623 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 PDLIM3Q53GG5 364 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-210ENST00000553455 SLC35E4Q6ICL7 350 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 ZNF770Q6IQ21 691 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-210ENST00000553455 C18orf65Q6ZTR6 163 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 PIGWQ7Z7B1 504 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 PHLDB2Q86SQ0 1253 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 MEX3DQ86XN8 651 aaKnown RBP4.64□□□□□ -1.67
SYNE2-210ENST00000553455 SIAH3Q8IW03 269 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 KIRREL3Q8IZU9 778 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 CARNMT1Q8N4J0 409 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 NAT8LQ8N9F0 302 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 OR4C3Q8NH37 302 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 HPSE2Q8WWQ2 592 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 KLHL5Q96PQ7 755 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 NODALQ96S42 347 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 THAP2Q9H0W7 228 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 SDCBP2Q9H190 292 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 R4GN57 208 aa4.64□□□□□ -1.67
SYNE2-210ENST00000553455 KRTAP29-1A8MX34 341 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 MOCS2O96007 188 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 GH1P01241 217 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 IL10RBQ08334 325 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 MORF4L2Q15014 288 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 EXT1Q16394 746 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 KIAA1644Q3SXP7 199 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 CTR9Q6PD62 1173 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 MEX3BQ6ZN04 569 aaKnown RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 GPR141Q7Z602 305 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 LRTM2Q8N967 370 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 TRIM58Q8NG06 486 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 OR13C3Q8NGS6 347 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 OR2T11Q8NH01 316 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 LRRC8CQ8TDW0 803 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 PIK3R3Q92569 461 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 UHRF2Q96PU4 802 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 ATG101Q9BSB4 218 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 MTMR12Q9C0I1 747 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 RIMS4Q9H426 269 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 RAVER2Q9HCJ3 691 aaKnown RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 SDF2L1Q9HCN8 221 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 NOCTQ9UK39 431 aaKnown RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 PROCRQ9UNN8 238 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 KCNJ14Q9UNX9 436 aa4.63□□□□□ -1.67
SYNE2-210ENST00000553455 PA2G4Q9UQ80 394 aaKnown RBP4.63□□□□□ -1.67
SYNE2-210ENST00000553455 MYH14Q7Z406 1995 aaKnown RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 A0A0B4J203 849 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 ILVBLA1L0T0 632 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 LRRD1A4D1F6 860 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 EME2A4GXA9 379 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 TMEM150CB9EJG8 249 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 H0YIG0 161 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 GLRA3O75311 464 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 CLPTM1O96005 669 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 PRSS1P07477 247 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 UMODP07911 640 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 DLATP10515 647 aaKnown RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 ALDH4A1P30038 563 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 GLIPR1P48060 266 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 SNU13P55769 128 aaKnown RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 STX1BP61266 288 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 HERV-K104P61576 105 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 PHEXP78562 749 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 HNRNPA0Q13151 305 aaKnown RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 PPP2R5CQ13362 524 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 SLC39A12Q504Y0 691 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 ODF2Q5BJF6 829 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 ZNF789Q5FWF6 425 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 RUSC1-AS1Q66K80 236 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 CEACAM20Q6UY09 585 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 KCTD9Q7L273 389 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 CPEB2Q7Z5Q1 589 aaKnown RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 UNC45BQ8IWX7 931 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 AQP12AQ8IXF9 295 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 CLYBLQ8N0X4 340 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 C10orf53Q8N6V4 93 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 CCDC63Q8NA47 563 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 MSANTD4Q8NCY6 345 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 OR10V1Q8NGI7 309 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 SLC26A7Q8TE54 656 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 PI4K2AQ9BTU6 479 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 FBXL5Q9UKA1 691 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 GRID1Q9ULK0 1009 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 RUVBL2Q9Y230 463 aaKnown RBP4.62□□□□□ -1.67
SYNE2-210ENST00000553455 LRP12Q9Y561 859 aa4.62□□□□□ -1.67
SYNE2-210ENST00000553455 TTI1O43156 1089 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 KINO60870 393 aaKnown RBP4.61□□□□□ -1.67
SYNE2-210ENST00000553455 CDK2AP2O75956 126 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 ATP1B1P05026 303 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 EDN1P05305 212 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 CD48P09326 243 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 UROSP10746 265 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 PIK3R1P27986 724 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 HNF4AP41235 474 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 IER3P46695 156 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 NPBWR1P48145 328 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 KHKP50053 298 aa4.61□□□□□ -1.67
SYNE2-210ENST00000553455 CDR2Q01850 454 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms