RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 ZG16O60844 167 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CTSVO60911 334 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 GPC4O75487 556 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 JRKO75564 520 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 SUN1O94901 812 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 SLCO2B1O94956 709 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 C1orf105O95561 183 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 SYF2O95926 243 aaKnown RBP9.45□□□□□ -0.9
ACTN1-208ENST00000553370 F10P00742 488 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 PCSK2P16519 638 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CHRM3P20309 590 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 FDXRP22570 491 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 FMO4P31512 558 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 GRIA1P42261 906 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 EMP2P54851 167 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CASP6P55212 293 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CRADDP78560 199 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 RBPJQ06330 500 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 PCID2Q5JVF3 399 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 FRMPD2BQ6IN97 320 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CASC4Q6P4E1 433 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 GFRALQ6UXV0 394 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF534Q76KX8 674 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 NDUFAF7Q7L592 441 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 TMEM151BQ8IW70 566 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 DTWD1Q8N5C7 304 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CSNK1A1LQ8N752 337 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 OR2L3Q8NG85 312 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 BRIX1Q8TDN6 353 aaKnown RBP9.45□□□□□ -0.9
ACTN1-208ENST00000553370 METTL21AQ8WXB1 218 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 MMABQ96EY8 250 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF778Q96MU6 729 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 ZFYVE21Q9BQ24 234 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 DPH7Q9BTV6 452 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 IL22Q9GZX6 179 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 CHRAC1Q9NRG0 131 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 C14orf105Q9NVL8 296 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 RIC8BQ9NVN3 520 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 MARCH4Q9P2E8 410 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-208ENST00000553370 COPG2Q9UBF2 871 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 SH3BGRL2Q9UJC5 107 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 NFS1Q9Y697 457 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 F8P00451 2351 aa9.45□□□□□ -0.9
ACTN1-208ENST00000553370 TRGV8A0A0C4DH27 118 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 FITM1A5D6W6 292 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 KRT87PA6NCN2 255 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 WIPF3A6NGB9 483 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 IDSB3KWA1 339 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 H3BMM5 538 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 E2F3O00716 465 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 FFAR3O14843 346 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 GPR42O15529 346 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 PHF2O75151 1096 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 CATP04040 527 aaKnown RBP9.44□□□□□ -0.9
ACTN1-208ENST00000553370 PKMP14618 531 aaKnown RBP9.44□□□□□ -0.9
ACTN1-208ENST00000553370 ETS1P14921 441 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 PAMP19021 973 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 PSMA3P25788 255 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 TERF1P54274 439 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
ACTN1-208ENST00000553370 INAQ16352 499 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 LONRF1Q17RB8 773 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 TTLL9Q3SXZ7 439 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 VWA2Q5GFL6 755 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 MEI1Q5TIA1 1274 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 ABHD17BQ5VST6 288 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 TMEM214Q6NUQ4 689 aaKnown RBP9.44□□□□□ -0.9
ACTN1-208ENST00000553370 C4orf22Q6V702 233 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 RNF44Q7L0R7 432 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 PRUNE1Q86TP1 453 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 CATSPER1Q8NEC5 780 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 SMPDL3AQ92484 453 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 HES6Q96HZ4 224 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 LMF1Q96S06 567 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 TSGA10Q9BZW7 698 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 CCDC68Q9H2F9 335 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 PLA2G3Q9NZ20 509 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 SAMD15Q9P1V8 674 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 STOX2Q9P2F5 926 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-208ENST00000553370 TEKT2Q9UIF3 430 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 INTS1Q8N201 2190 aaKnown RBP9.44□□□□□ -0.9
ACTN1-208ENST00000553370 DNAJC13O75165 2243 aa9.44□□□□□ -0.9
ACTN1-208ENST00000553370 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 LOC105369274A0A096LPK9 316 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 LOC102723532A0A0G2JNH3 316 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 CTAGE9A4FU28 777 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 PABPN1LA6NDY0 278 aaKnown RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 VSTM2BA6NLU5 285 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 H0YGG7 62 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 TXNDC9O14530 226 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 NIPSNAP2O75323 286 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 KLHL18O94889 574 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 VAPBO95292 243 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 CRYABP02511 175 aaKnown RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 SERPINA7P05543 415 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 PRR35P0CG20 571 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 RPS3P23396 243 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■□□□ 11.8
ACTN1-208ENST00000553370 MGAT1P26572 445 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 AVPR1BP47901 424 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms