RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ATOH8Q96SQ7 321 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 CCDC77Q9BR77 488 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 EFHD1Q9BUP0 239 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 FAM117AQ9C073 453 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 ALG9Q9H6U8 611 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 CNOT10Q9H9A5 744 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 GPN2Q9H9Y4 310 aaPredicted RBP11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 LHX9Q9NQ69 397 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 TMEM184CQ9NVA4 438 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 IRAK4Q9NWZ3 460 aa11.22□□□□□ -0.61
TRAFD1-209ENST00000552896 A0A0J9YVX5 310 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 LOC101059948A0A1B0GTJ6 334 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NCF1BA6NI72 391 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SYCE1LA8MT33 242 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NCF1CA8MVU1 366 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 C21orf140B9A014 251 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 TRIM49D1C9J1S8 452 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 K7ENP7 123 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 TERTO14746 1132 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SRPX2O60687 465 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CTSBP07858 339 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CDH1P12830 882 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NCF1P14598 390 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NPPBP16860 134 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 GGT5P36269 586 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 GMPRP36959 345 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 RPS15AP62244 130 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 VAC14Q08AM6 782 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SRSF6Q13247 344 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 GRM7Q14831 915 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 ACAP2Q15057 778 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 TSNAXIP1Q2TAA8 658 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 LGSNQ5TDP6 509 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 PRAMEF17Q5VTA0 474 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 ZNF385CQ66K41 422 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SULT1C3Q6IMI6 304 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 FRMPD2BQ6IN97 320 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 INO80CQ6PI98 192 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CCDC81Q6ZN84 652 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 THOC6Q86W42 341 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 ZNF655Q8N720 491 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 TTC29Q8NA56 475 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SLC38A9Q8NBW4 561 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 ABHD11Q8NFV4 315 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CT55Q8WUE5 264 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 EXT2Q93063 718 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 ALKBH8Q96BT7 664 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NXNL1Q96CM4 212 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CLIP3Q96DZ5 547 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 RNF31Q96EP0 1072 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CABS1Q96KC9 395 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 TMEM79Q9BSE2 394 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NDC1Q9BTX1 674 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SLC7A5P2Q9GIP4 190 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SPRTNQ9H040 489 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 PCMTD2Q9NV79 361 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 WWOXQ9NZC7 414 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CD274Q9NZQ7 290 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 CROTQ9UKG9 612 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 PADI1Q9ULC6 663 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 V9GYY5 206 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-209ENST00000552896 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.62
TRAFD1-209ENST00000552896 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 A0A1B0GX78 115 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 SUPT3HB4E1H0 165 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 H7BY64 318 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 MEN1O00255 615 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 EFSO43281 561 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 SUPT3HO75486 399 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 WDR47O94967 919 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 KLK3P07288 261 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 COL6A2P12110 1019 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 GRK3P35626 688 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 DLSTP36957 453 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 HSD17B3P37058 310 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 CCR8P51685 355 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 ARSFP54793 590 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 EMP3P54852 163 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 VSX2P58304 361 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 CXADRP78310 365 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 CSNK1G2P78368 415 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 RASA2Q15283 850 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 COL28A1Q2UY09 1125 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 PRTGQ2VWP7 1150 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 TECRLQ5HYJ1 363 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 FAM198BQ6UWH4 519 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 TIFABQ6ZNK6 161 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 LRRC70Q7Z2Q7 622 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 LCA5Q86VQ0 697 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 TDRPQ86YL5 185 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 ZSCAN1Q8NBB4 408 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 SLC5A11Q8WWX8 675 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 MR1Q95460 341 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 CAVIN3Q969G5 261 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 NEIL2Q969S2 332 aa11.2□□□□□ -0.62
TRAFD1-209ENST00000552896 RERGQ96A58 199 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms