RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 EFNA3P52797 238 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 RWDD2BP57060 319 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 AP2B1P63010 937 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 MPP3Q13368 585 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 ERCC6LQ2NKX8 1250 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 WASHC2DQ5SRD0 308 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 ARHGEF18Q6ZSZ5 1173 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 NEK10Q6ZWH5 1172 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 CCDC50Q8IVM0 306 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 CLDN19Q8N6F1 224 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 IPMKQ8NFU5 416 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 ASB5Q8WWX0 329 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 HES7Q9BYE0 225 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 LIME1Q9H400 295 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 VPS37BQ9H9H4 285 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 COQ3Q9NZJ6 369 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 TDRKHQ9Y2W6 561 aaKnown RBP10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 KLK4Q9Y5K2 254 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 HRH3Q9Y5N1 445 aa10.78□□□□□ -0.68
SUPT16H-202ENST00000552829 SLC5A10A0PJK1 596 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 C2orf81A6NN90 581 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 EFCAB8A8MWE9 144 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TARM1B6A8C7 271 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 CTIFO43310 598 aaKnown RBP10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 PROM1O43490 865 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 AP2A2O94973 939 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TSPAN12O95859 305 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 AGTP01019 485 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 FGGP02679 453 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 RHOXF2BP0C7M4 288 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ZFXP17010 805 aaPredicted RBP10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ITGALP20701 1170 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 CXCR2P25025 360 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ZNF140P52738 457 aaPredicted RBP10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TERF1P54274 439 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 MRPS25P82663 173 aaKnown RBP10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ZNF33BQ06732 778 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TUBA3CQ13748 450 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 GRB7Q14451 532 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 CEBPEQ15744 281 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 GPR33Q49SQ1 333 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 RNFT1Q5M7Z0 435 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TUBA3EQ6PEY2 450 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 RANBP10Q6VN20 620 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 MICALCLQ6ZW33 695 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 EID3Q8N140 333 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ZNF567Q8N184 647 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 RASGEF1CQ8N431 466 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 LMNTD1Q8N9Z9 388 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 OR13C4Q8NGS5 318 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 HDAC10Q969S8 669 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ZUFSPQ96AP4 578 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 C10orf90Q96M02 699 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ALPK1Q96QP1 1244 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 GORASP1Q9BQQ3 440 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 RHOXF2Q9BQY4 288 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 UCK2Q9BZX2 261 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TGIF2Q9GZN2 237 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 INTS7Q9NVH2 962 aaKnown RBP10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 DNAJB12Q9NXW2 375 aaKnown RBP10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 LCMT1Q9UIC8 334 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 TEKT2Q9UIF3 430 aa10.77□□□□□ -0.69
SUPT16H-202ENST00000552829 ZANQ9Y493 2812 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 LRRD1A4D1F6 860 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 NKX2-6A6NCS4 301 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 PRRG2O14669 202 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 CTAG2O75638 210 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 S1PR4O95977 384 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 FBLP22087 321 aaKnown RBP10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 ACRV1P26436 265 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 CHRNB4P30926 498 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 ADRA1AP35348 466 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 CD96P40200 585 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 TNNT3P45378 269 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 VSX2P58304 361 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 HSF1Q00613 529 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 PRTGQ2VWP7 1150 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 ODF2Q5BJF6 829 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 ACER2Q5QJU3 275 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 FRMPD2BQ6IN97 320 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 SERPINA9Q86WD7 417 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 KLHL7Q8IXQ5 586 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 BEST3Q8N1M1 668 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 SPATA4Q8NEY3 305 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 ACTRT1Q8TDG2 376 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 SLC22A18Q96BI1 424 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 MBD6Q96DN6 1003 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 NPAS2Q99743 824 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 SMR3AQ99954 134 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 TUBB6Q9BUF5 446 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 KCNJ16Q9NPI9 418 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 STOX2Q9P2F5 926 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 RNF6Q9Y252 685 aa10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.76□□□□□ -0.69
SUPT16H-202ENST00000552829 LOC105369274A0A096LPK9 316 aa10.75□□□□□ -0.69
SUPT16H-202ENST00000552829 LOC102723532A0A0G2JNH3 316 aa10.75□□□□□ -0.69
SUPT16H-202ENST00000552829 TCRBV7S2A1N4TA0A589 114 aa10.75□□□□□ -0.69
SUPT16H-202ENST00000552829 CCL22O00626 93 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms