RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	ANKRD46	Q86W74	232 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	EPHX4	Q8IUS5	362 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	MICU2	Q8IYU8	434 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PHACTR4	Q8IZ21	702 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	C10orf111	Q8N326	155 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GALNT4	Q8N4A0	578 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	MARVELD2	Q8N4S9	558 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	TRPV3	Q8NET8	790 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR2T12	Q8NG77	320 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR7A2P	Q8NGA2	310 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR10A6	Q8NH74	314 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	SETD7	Q8WTS6	366 aa	Known RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	TFG	Q92734	400 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GFM2	Q969S9	779 aa	Known RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	EME1	Q96AY2	570 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	REPS1	Q96D71	796 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	AURKB	Q96GD4	344 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	ITCH	Q96J02	903 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	ZNF597	Q96LX8	424 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	NRTN	Q99748	197 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLC29A1	Q99808	456 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	MENT	Q9BUN1	341 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	RMND5A	Q9H871	391 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	FBRS	Q9HAH7	460 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	DMRT3	Q9NQL9	472 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	SIRT5	Q9NXA8	310 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	SPATA7	Q9P0W8	599 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	AP3M1	Q9Y2T2	418 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR1A2	Q9Y585	309 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PCDHB14	Q9Y5E9	798 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	MDC1	Q14676	2089 aa	Known RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	KANSL1L	A0AUZ9	987 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	ARHGAP10	A1A4S6	786 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRR19	A6NJB7	356 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	SAC3D1	A6NKF1	404 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	VGLL3	A8MV65	326 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	SCAMP2	O15127	329 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PI15	O43692	258 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	TPST1	O60507	370 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	MYO1D	O94832	1006 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PAK4	O96013	591 aa	Predicted RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	DNTT	P04053	509 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	CKMT2	P17540	419 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	FAS	P25445	335 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	KIR3DL1	P43629	444 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	HSPA13	P48723	471 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	ADPRH	P54922	357 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PPP2CB	P62714	309 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	RPS21	P63220	83 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PPP2CA	P67775	309 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	MEF2A	Q02078	507 aa	Predicted RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRKCQ	Q04759	706 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLC14A1	Q13336	389 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	LAPTM5	Q13571	262 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	COL19A1	Q14993	1142 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	PDK3	Q15120	406 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	ATP6AP1	Q15904	470 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	SPIN4	Q56A73	249 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	UGT2A3	Q6UWM9	527 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	GPR155	Q7Z3F1	870 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	HORMAD1	Q86X24	394 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	TBC1D21	Q8IYX1	336 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	TMEM132C	Q8N3T6	1108 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	SMRP1	Q8NCR6	262 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR5K2	Q8NHB8	316 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	OR14C36	Q8NHC7	312 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	CDC26	Q8NHZ8	85 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	GANC	Q8TET4	914 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	MIEF2	Q96C03	454 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	GBP5	Q96PP8	586 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	CIB1	Q99828	191 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	SH3GL1	Q99961	368 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	TIMM29	Q9BSF4	260 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	THUMPD3	Q9BV44	507 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	OSBPL6	Q9BZF3	934 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	VCX	Q9H320	206 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	KAT8	Q9H7Z6	458 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	CARS2	Q9HA77	564 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	LMCD1	Q9NZU5	365 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	DLGAP2	Q9P1A6	1054 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	BTBD3	Q9Y2F9	522 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	TDRKH	Q9Y2W6	561 aa	Known RBP	11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	TSC22D4	Q9Y3Q8	395 aa		11.09	□□□□□ -0.63
RAB5C-208	ENST00000551338	MYO10	Q9HD67	2058 aa		11.08	□□□□□ -0.63
RAB5C-208	ENST00000551338	MKI67	P46013	3256 aa	Known RBP	11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338		A0A1W2PPV9	198 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	ELOVL7	A1L3X0	281 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	FAM149A	A5PLN7	773 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	DPPA5	A6NC42	116 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	FOXE1	O00358	373 aa	Predicted RBP	11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	CXCR6	O00574	342 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	SOCS2	O14508	198 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	FPGT	O14772	594 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	YY2	O15391	372 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	SCEL	O95171	688 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	GSN	P06396	782 aa		11.08	□□□□□ -0.64
RAB5C-208	ENST00000551338	CEACAM5	P06731	702 aa		11.08	□□□□□ -0.64

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