RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 HYKKA2RU49 373 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ENO4A6NNW6 628 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 A8MUI8 341 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 H0YGG7 62 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 I3L1I5 382 aaPredicted RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 P2RX6O15547 441 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 PRICKLE3O43900 615 aaPredicted RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 DNAJB6O75190 326 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 NIPSNAP2O75323 286 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 STK10O94804 968 aaKnown RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 UNC5CO95185 931 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 B3GALT4O96024 378 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 FTH1P02794 183 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TPM3P06753 285 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 HBQ1P09105 142 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ZGLP1P0C6A0 271 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 MSL3P1P0C860 447 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 NMBRP28336 390 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 FMO4P31512 558 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 NSG1P42857 185 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 RAB28P51157 221 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 NR0B1P51843 470 aaKnown RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 PGGT1BP53609 377 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 EIF3BP55884 814 aaKnown RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 RWDD2BP57060 319 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ARF3P61204 181 aaPredicted RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ARG2P78540 354 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 HSF1Q00613 529 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 RPA4Q13156 261 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 KIR2DS3Q14952 304 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SPA17Q15506 151 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TUBB8Q3ZCM7 444 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TSTD2Q5T7W7 516 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 FBXO42Q6P3S6 717 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TLDC1Q6P9B6 456 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF449Q6P9G9 518 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 GFRALQ6UXV0 394 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 PPP1R21Q6ZMI0 780 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 LANCL3Q6ZV70 420 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SLC22A15Q8IZD6 547 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 PROKR1Q8TCW9 393 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 STYXQ8WUJ0 223 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ALS2CR12Q96Q35 445 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 DPH2Q9BQC3 489 aaPredicted RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TRIM5Q9C035 493 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 LHPPQ9H008 270 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 LRRC40Q9H9A6 602 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 VPS37BQ9H9H4 285 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SYTL2Q9HCH5 934 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 KLHL1Q9NR64 748 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 AGPAT4Q9NRZ5 378 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 OLAHQ9NV23 265 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 OR6C2Q9NZP2 312 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 COPG2Q9UBF2 871 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TRPC4Q9UBN4 977 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SLC39A10Q9ULF5 831 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SPG11Q96JI7 2443 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 NIPBLQ6KC79 2804 aaeCLIP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 NUP210LQ5VU65 1888 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 IGKV1-8A0A0C4DH67 115 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TCRBV7S3A2A0A539 114 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 VSTM2BA6NLU5 285 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 FAM227AF5H4B4 570 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 H7C0S8 307 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CCL21O00585 134 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 RASGRF2O14827 1237 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 DIAPH2O60879 1101 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 AVILO75366 819 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 GPC4O75487 556 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 SEC24DO94855 1032 aaPredicted RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 AP2A2O94973 939 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TJP3O95049 919 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 C1orf105O95561 183 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 WDPCPO95876 746 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 UQCRHP07919 91 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 OR56A5P0C7T3 313 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 PRR35P0CG20 571 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 COX6A1P12074 109 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 NID1P14543 1247 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 EPHA1P21709 976 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 FBLP22087 321 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 AOAHP28039 575 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CDC25BP30305 580 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TSFMP43897 325 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TDGF1P3P51864 188 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 SOX8P57073 446 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 KLF1Q13351 362 aaPredicted RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CUL1Q13616 776 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TRIP13Q15645 432 aaPredicted RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 TSNAXIP1Q2TAA8 658 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 FASTKD1Q53R41 847 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 CTSL3PQ5NE16 218 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 PTRHD1Q6GMV3 140 aaKnown RBP6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 FAM180AQ6UWF9 173 aa6.5□□□□□ -1.37
PRPF40B-214ENST00000551320 IGFL2Q6UWQ7 119 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms