RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SLC17A6Q9P2U8 582 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SESN1Q9Y6P5 492 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 H7BY64 318 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 MATN2O00339 956 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 KCNJ13O60928 360 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 IL7RP16871 459 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 CTHP32929 405 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 UGT2B15P54855 530 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 LGALS3BPQ08380 585 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SP140Q13342 867 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 OLIG2Q13516 323 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 GCNT6Q5T4J0 391 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PTCD3Q96EY7 689 aaKnown RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 SCRN2Q96FV2 425 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 PRAP1Q96NZ9 151 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 CDADC1Q9BWV3 514 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 DEFB126Q9BYW3 111 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 METTL7AQ9H8H3 244 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 KCNK12Q9HB15 430 aa11.85□□□□□ -0.51
NR4A1-215ENST00000550557 DNAAF2Q9NVR5 837 aaKnown RBP11.85□□□□□ -0.51
NR4A1-215ENST00000550557 DUXAA6NLW8 204 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 OR6B1O95007 311 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 DCNP07585 359 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 FHP07954 510 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 LINGO3P0C6S8 592 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 CLDN2P57739 230 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 HKDC1Q2TB90 917 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 TTC23Q5W5X9 447 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 FRG2Q64ET8 278 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 NEK5Q6P3R8 708 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 PARM1Q6UWI2 310 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 CPSF7Q8N684 471 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 KCNN1Q92952 543 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 RTP4Q96DX8 246 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 TEFMQ96QE5 360 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 FRG2BQ96QU4 278 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 MAFKO60675 156 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ECI2O75521 394 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ALOX5P09917 674 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 HRH2P25021 359 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ITGA3P26006 1051 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 SPINT3P49223 89 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 POLR2JP52435 117 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 RPS14P62263 151 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 SPIBQ01892 262 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ACY1Q03154 408 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 C6orf52Q5T4I8 152 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 KCNJ9Q92806 393 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 PPM1MQ96MI6 270 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 PTCHD1Q96NR3 888 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 VPS35Q96QK1 796 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 APOOQ9BUR5 198 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 SDHAF3Q9NRP4 125 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 RAPGEFL1Q9UHV5 662 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 VSTM5A8MXK1 200 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 UGT2B17O75795 530 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 NR0B2Q15466 257 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ARMC4Q5T2S8 1044 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 GAREM2Q75VX8 874 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 OR2T12Q8NG77 320 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 SLITRK2Q9H156 845 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 RMI1Q9H9A7 625 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 F5P12259 2224 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 POLR1CO15160 346 aaPredicted RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ITM2AO43736 263 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 FBLP22087 321 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ATP1A4Q13733 1029 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 HSF5Q4G112 596 aaPredicted RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 GK5Q6ZS86 529 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 FAM92BQ6ZTR7 304 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 ADGRG6Q86SQ4 1221 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 GPR65Q8IYL9 337 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 C19orf18Q8NEA5 215 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 WDR36Q8NI36 951 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 RELTQ969Z4 430 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 CLK4Q9HAZ1 481 aaKnown RBP11.84□□□□□ -0.51
NR4A1-215ENST00000550557 OBP2AQ9NY56 170 aa11.84□□□□□ -0.51
NR4A1-215ENST00000550557 IFNGP01579 166 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 HBQ1P09105 142 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 CDH1P12830 882 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 EFNA1P20827 205 aaPredicted RBP11.83□□□□□ -0.52
NR4A1-215ENST00000550557 PSMB9P28065 219 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 SRP54P61011 504 aaKnown RBP11.83□□□□□ -0.52
NR4A1-215ENST00000550557 PTSQ03393 145 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 RAB6CQ53S08 254 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
NR4A1-215ENST00000550557 NUP54Q7Z3B4 507 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 GALNT7Q86SF2 657 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 CMKLR1Q99788 373 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 RAB6CQ9H0N0 254 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 ZNF395Q9H8N7 513 aaPredicted RBP11.83□□□□□ -0.52
NR4A1-215ENST00000550557 PREBQ9HCU5 417 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 AOC1P19801 751 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 OTX2P32243 289 aa11.83□□□□□ -0.52
NR4A1-215ENST00000550557 PDSS1Q5T2R2 415 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms