RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	ZDHHC13	Q8IUH4	622 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	RIMKLA	Q8IXN7	391 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	LIX1	Q8N485	282 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	GALNT4	Q8N4A0	578 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	TSPAN14	Q8NG11	270 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	LKAAEAR1	Q8TD35	194 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	AP2M1	Q96CW1	435 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	NRBF2	Q96F24	287 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	DTD2	Q96FN9	168 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	TEX37	Q96LM6	180 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	CNBD2	Q96M20	576 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	COQ10A	Q96MF6	247 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	CDK15	Q96Q40	435 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	PHF12	Q96QT6	1004 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	TUBA1C	Q9BQE3	449 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	C1orf50	Q9BV19	199 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	THUMPD3	Q9BV44	507 aa	Known RBP	11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	CHID1	Q9BWS9	393 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	HDAC8	Q9BY41	377 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	RAD21L1	Q9H4I0	556 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	KAT8	Q9H7Z6	458 aa	Known RBP	11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	IL1RL2	Q9HB29	575 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	TRIM39	Q9HCM9	518 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	DYRK4	Q9NR20	520 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	ATAD3A	Q9NVI7	634 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	USE1	Q9NZ43	259 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	PTTG2	Q9NZH5	202 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	IFT80	Q9P2H3	777 aa	Predicted RBP	11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	BTNL2	Q9UIR0	455 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	RPS6KA6	Q9UK32	745 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	LHX6	Q9UPM6	363 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	INVS	Q9Y283	1065 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	PTGDR2	Q9Y5Y4	395 aa		11.45	□□□□□ -0.58
LETMD1-223	ENST00000550442	TMEM8B	A6NDV4	472 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	GDF9	O60383	454 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	TIPRL	O75663	272 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	PDYN	P01213	254 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	LAMP2	P13473	410 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	AMD1	P17707	334 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CXCR2	P25025	360 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	GK	P32189	559 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CAPG	P40121	348 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	PIK3CB	P42338	1070 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	MAGEA8	P43361	318 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	RPS9	P46781	194 aa	Known RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ALDH3A2	P51648	485 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	TOP3A	Q13472	1001 aa	Predicted RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	HTR4	Q13639	388 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CAPRIN1	Q14444	709 aa	Known RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	AGER	Q15109	404 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	EML3	Q32P44	896 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	FAM174B	Q3ZCQ3	159 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	TMEM259	Q4ZIN3	620 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	NOXRED1	Q6NXP6	359 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	NEK5	Q6P3R8	708 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	HSD11B1L	Q7Z5J1	315 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CALHM3	Q86XJ0	350 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	HIPK1	Q86Z02	1210 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	SLC30A8	Q8IWU4	369 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ETFBKMT	Q8IXQ9	262 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	MICU2	Q8IYU8	434 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	TRIML2	Q8N7C3	387 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	KDF1	Q8NAX2	398 aa	Predicted RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	SKA2	Q8WVK7	121 aa	Predicted RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	NCLN	Q969V3	563 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ESAM	Q96AP7	390 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CIB1	Q99828	191 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	RBM4B	Q9BQ04	359 aa	Known RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	SLC39A3	Q9BRY0	314 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ADI1	Q9BV57	179 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	RIOK2	Q9BVS4	552 aa	Known RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	RBM4	Q9BWF3	364 aa	Known RBP	11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ACPT	Q9BZG2	426 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ABCG8	Q9H221	673 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	PIDD1	Q9HB75	910 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	AHSP	Q9NZD4	102 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	EGFL7	Q9UHF1	273 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	BLOC1S6	Q9UL45	172 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	CCL26	Q9Y258	94 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	ASB1	Q9Y576	335 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	HSPE1-MOB4	S4R3N1	261 aa		11.44	□□□□□ -0.58
LETMD1-223	ENST00000550442	GCN1	Q92616	2671 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	C7orf72	A4D263	438 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ANHX	E9PGG2	379 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442		H3BM21	787 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	AREL1	O15033	823 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ZZEF1	O43149	2961 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	MRPS14	O60783	128 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	TFAP2A	P05549	437 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ITGB6	P18564	788 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	PTX3	P26022	381 aa	Predicted RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	HPCAL1	P37235	193 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	HAL	P42357	657 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	HTR6	P50406	440 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ERF	P50548	548 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	PFN3	P60673	137 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ACSM2A	Q08AH3	577 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms