RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CCSMST1Q4G0I0 132 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 GLYATQ6IB77 296 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 MED27Q6P2C8 311 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 ERICH5Q6P6B1 374 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 USP30Q70CQ3 517 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 MICU2Q8IYU8 434 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 METTL4Q8N3J2 472 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 HIPK4Q8NE63 616 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 OR2AG1Q9H205 316 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 ICKQ9UPZ9 632 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 PCDHB14Q9Y5E9 798 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 TOR1BO14657 336 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 PABPC4LP0CB38 370 aaKnown RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 TCN1P20061 433 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 OXTRP30559 389 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 S100A3P33764 101 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 PREPP48147 710 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 HTR4Q13639 388 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 VEZF1Q14119 521 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 SLC36A3Q495N2 470 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 XKR6Q5GH73 641 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 TBCELQ5QJ74 424 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 ATAT1Q5SQI0 421 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF776Q68DI1 518 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 LRRTM4Q86VH4 590 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 TMEM132CQ8N3T6 1108 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 LILRA3Q8N6C8 439 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 KRTCAP2Q8N6L1 136 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 PJA1Q8NG27 643 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 MSANTD3Q96H12 275 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 RIPOR3Q96MK2 946 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 OR52E6Q96RD3 313 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 UGT2B28Q9BY64 529 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 GABARAPL1Q9H0R8 117 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 DMRT3Q9NQL9 472 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 TUBA8Q9NY65 449 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 ZFR2Q9UPR6 939 aaKnown RBP9.64□□□□□ -0.87
RAB5B-206ENST00000549505 CORO2BQ9UQ03 480 aa9.64□□□□□ -0.87
RAB5B-206ENST00000549505 GLULP15104 373 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 BDKRB1P46663 353 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 RPS6KA3P51812 740 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 TBPL1P62380 186 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 NAE1Q13564 534 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 GRAMD1BQ3KR37 738 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 ANXA8L1Q5VT79 327 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 RAET1GQ6H3X3 334 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 FAM83HQ6ZRV2 1179 aaPredicted RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 DENND6BQ8NEG7 585 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 NELL1Q92832 810 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 RAD51AP1Q96B01 352 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 NECTIN4Q96NY8 510 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 ADAM29Q9UKF5 820 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 EXO1Q9UQ84 846 aaKnown RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 DOCK8Q8NF50 2099 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 ELOVL7A1L3X0 281 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 TBC1D3BA6NDS4 549 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 MYCLP1P12525 358 aaPredicted RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 TACR1P25103 407 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 TIA1P31483 386 aaKnown RBP eCLIP9.63□□□□□ -0.872e-9■■■□□ 18.3
RAB5B-206ENST00000549505 FRKP42685 505 aaPredicted RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 AAK1Q2M2I8 961 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 WASH2PQ6VEQ5 465 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 PIWIL3Q7Z3Z3 882 aaKnown RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 MMAAQ8IVH4 418 aaKnown RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 PLA2G15Q8NCC3 412 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 OR2T12Q8NG77 320 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 SLC5A11Q8WWX8 675 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 NSMCE2Q96MF7 247 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 SLC29A1Q99808 456 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 TRMT61BQ9BVS5 477 aaKnown RBP9.63□□□□□ -0.87
RAB5B-206ENST00000549505 IKZF5Q9H5V7 419 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 COQ6Q9Y2Z9 468 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 CHD9Q3L8U1 2897 aa9.63□□□□□ -0.87
RAB5B-206ENST00000549505 A0A1B0GVG6 124 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 C9JVG2 144 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TNFAIP8O95379 198 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 IDSP22304 550 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ITPKAP23677 461 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 HALP42357 657 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 MAGEA8P43361 318 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 KIAA1024LP59773 190 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 RPS21P63220 83 aaKnown RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TUBA4AP68366 448 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ADARB1P78563 741 aaKnown RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 REEP5Q00765 189 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 MYBPC1Q00872 1141 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 KCTD21Q4G0X4 260 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PARM1Q6UWI2 310 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CYP2R1Q6VVX0 501 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 AMZ2Q86W34 360 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 YAF2Q8IY57 180 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CHPFQ8IZ52 775 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 SVOPLQ8N434 492 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF366Q8N895 744 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 HUS1BQ8NHY5 278 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 232.4 ms