RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SIRT5Q9NXA8 310 aa9.58□□□□□ -0.88
SMARCD1-205ENST00000548573 PSORS1C1Q9UIG5 152 aa9.58□□□□□ -0.88
SMARCD1-205ENST00000548573 FCF1Q9Y324 198 aaKnown RBP9.58□□□□□ -0.88
SMARCD1-205ENST00000548573 TESMINQ9Y4I5 508 aa9.58□□□□□ -0.88
SMARCD1-205ENST00000548573 PCDHGB3Q9Y5G1 929 aa9.58□□□□□ -0.88
SMARCD1-205ENST00000548573 SCN8AQ9UQD0 1980 aa9.58□□□□□ -0.88
SMARCD1-205ENST00000548573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SCAMP3O14828 347 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SEPT4O43236 478 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SCN2BO60939 215 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 RFPL2O75678 378 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 LRATO95237 230 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 RPLP0P05388 317 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 COL6A1P12109 1028 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 BPIP17213 487 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 MZF1P28698 734 aaPredicted RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SPAM1P38567 509 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 NSG1P42857 185 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC6A12P48065 614 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 HNMTP50135 292 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 NEK2P51955 445 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 PTPN5P54829 565 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 WNT3P56703 355 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 C21orf58P58505 322 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF33BQ06732 778 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 KRR1Q13601 381 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 CHRNA6Q15825 494 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 KCNA10Q16322 511 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SYT16Q17RD7 645 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 TIGD6Q17RP2 521 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 MFSD14CQ5VZR4 134 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 STEAP3Q658P3 488 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC46A3Q7Z3Q1 461 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 AKAP14Q86UN6 197 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SYNPOQ8N3V7 929 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 C7orf34Q96L11 122 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 APOLD1Q96LR9 279 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 GKN1Q9NS71 199 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 TRMT13Q9NUP7 481 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 MARCH5Q9NX47 278 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 CCDC59Q9P031 241 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 PADI2Q9Y2J8 665 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 CLCA1A8K7I4 914 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SNPHO15079 494 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 TBX1O43435 398 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 PARNO95453 639 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 CLDN7O95471 211 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 CDK1P06493 297 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 C8GP07360 202 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 S100A1P23297 94 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 GADD45AP24522 165 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 GGT2P36268 569 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 KCNJ10P78508 379 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ELAVL2Q12926 359 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 UGT8Q16880 541 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 FBXO43Q4G163 708 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 PRSS36Q5K4E3 855 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 RTP2Q5QGT7 225 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF362Q5T0B9 420 aaPredicted RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 TPRG1LQ5T0D9 272 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ATAD3BQ5T9A4 648 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 FRG2Q64ET8 278 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 PDE12Q6L8Q7 609 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 FUT10Q6P4F1 479 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF621Q6ZSS3 439 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ANKS3Q6ZW76 656 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ZSWIM9Q86XI8 627 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SYT12Q8IV01 421 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ADGRG2Q8IZP9 1017 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 DNAJC22Q8N4W6 341 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 POC5Q8NA72 575 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 KBTBD8Q8NFY9 601 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 HTRA1Q92743 480 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 ERLEC1Q96DZ1 483 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 FRG2BQ96QU4 278 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 YME1L1Q96TA2 773 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 RAD9AQ99638 391 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 SLX1AQ9BQ83 275 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 MOV10Q9HCE1 1003 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 TMEM161AQ9NX61 479 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 VPS51Q9UID3 782 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 STOML2Q9UJZ1 356 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 IFT52Q9Y366 437 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 PCDHB11Q9Y5F2 797 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 OR51B4Q9Y5P0 310 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 DNAH12Q6ZR08 3092 aa9.57□□□□□ -0.88
SMARCD1-205ENST00000548573 DSCR3O14972 297 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 KCNK2O95069 426 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 SNX4O95219 450 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 C1QCP02747 245 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 HIST1H2AGP0C0S8 130 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 CKBP12277 381 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 PTPN2P17706 415 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 HIST1H2ADP20671 130 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 AOAHP28039 575 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 C21orf33P30042 268 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 S100A5P33763 92 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms