RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PRAP1Q96NZ9 151 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 BDH2Q9BUT1 245 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 OSBPL11Q9BXB4 747 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 RUBCNLQ9H714 662 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MBNL1Q9NR56 388 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 THG1LQ9NWX6 298 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MYRFQ9Y2G1 1151 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MAP4K5Q9Y4K4 846 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3DA0A087WVF3 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3IA0A087WXS9 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3KA0A087X1G2 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3FA6NER0 549 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3LB9A6J9 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 DEAF1O75398 565 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 NME6O75414 186 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3HP0C7X1 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 RPS26P62854 115 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 RUNX3Q13761 415 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3GQ6DHY5 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3CQ6IPX1 549 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TICAM1Q8IUC6 712 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ZDHHC13Q8IUH4 622 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF547Q8IVP9 402 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D3Q8IZP1 549 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MARVELD2Q8N4S9 558 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 DDHD1Q8NEL9 900 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 SGCDQ92629 289 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TFGQ92734 400 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ZUFSPQ96AP4 578 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 C9orf16Q9BUW7 83 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 KLHL25Q9H0H3 589 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 RMND5AQ9H871 391 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 RDH14Q9HBH5 336 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 BAG5Q9UL15 447 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MAFFQ9ULX9 164 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 URB1O60287 2271 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 IGLV3-16A0A075B6K0 115 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 GLOD5A6NK44 160 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 KPNA5O15131 536 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 KIF1CO43896 1103 aaKnown RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 CREG1O75629 220 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 FGF19O95750 216 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ACPPP15309 386 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 IL7RP16871 459 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 AMD1P17707 334 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 HNMTP50135 292 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 PLA2G16P53816 162 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 AP1S2P56377 157 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 CAPN13Q6MZZ7 669 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-209ENST00000547018 SLC30A9Q6PML9 568 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TRIM46Q7Z4K8 759 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 USP7Q93009 1102 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MUS81Q96NY9 551 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 MCOLN1Q9GZU1 580 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TMEM245Q9H330 911 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 CLMPQ9H6B4 373 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 TRIM39Q9HCM9 518 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 ERVK-11Q9UQG0 969 aa12.29□□□□□ -0.44
SCAF11-209ENST00000547018 EDDM13A0A1B0GTR0 161 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 SPINT1O43278 529 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 MITFO75030 526 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 SLCO2B1O94956 709 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 ZBTB11O95625 1053 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 SMIM18P0DKX4 95 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 PIM1P11309 404 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 JUPP14923 745 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 OR1E2P47887 323 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 SLC6A12P48065 614 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 CCT8P50990 548 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 C2orf80Q0P641 193 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 CMPK2Q5EBM0 449 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 TBC1D21Q8IYX1 336 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 MPP4Q96JB8 637 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 CCDC138Q96M89 665 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 MAGEL2Q9UJ55 1249 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 FRYLO94915 3013 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 hCG_2014768A0A024R1R8 64 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 G3V2T6 193 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 PPM1DO15297 605 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 PCDH7O60245 1069 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 GPIP06744 558 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 GSTM1P09488 218 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 GSTM4Q03013 218 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 DLX2Q07687 328 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 PON2Q15165 354 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 UGT8Q16880 541 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 CPTPQ5TA50 214 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 ZDHHC20Q5W0Z9 365 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 AMZ2Q86W34 360 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 SPPL2AQ8TCT8 520 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 DOK4Q8TEW6 326 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 TIFAQ96CG3 184 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 AASDHPPTQ9NRN7 309 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms