RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CRNNQ9UBG3 495 aaPredicted RBP13.78□□□□□ -0.2
SRP54-202ENST00000546080 DKK3Q9UBP4 350 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 KLK4Q9Y5K2 254 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 PLK4O00444 970 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 CTDSP2O14595 271 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 FPGTO14772 594 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 SLITRK5O94991 958 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 CLDN9O95484 217 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 C1QCP02747 245 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 PRKCAP17252 672 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 TYMPP19971 482 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 CR2P20023 1033 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 TACR1P25103 407 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 MZF1P28698 734 aaPredicted RBP13.77□□□□□ -0.21
SRP54-202ENST00000546080 RRM2P31350 389 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 GRK4P32298 578 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 GJA5P36382 358 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 IDH2P48735 452 aaKnown RBP13.77□□□□□ -0.21
SRP54-202ENST00000546080 LIMK1P53667 647 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 CHRNEQ04844 493 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 CSTF3Q12996 717 aaKnown RBP13.77□□□□□ -0.21
SRP54-202ENST00000546080 TUSC3Q13454 348 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 C10orf62Q5T681 223 aaPredicted RBP13.77□□□□□ -0.21
SRP54-202ENST00000546080 RAB43Q86YS6 212 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 RASAL3Q86YV0 1011 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 SELENOMQ8WWX9 145 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 FBXO32Q969P5 355 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 CRELD1Q96HD1 420 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 OR2A14Q96R47 310 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 RAD9AQ99638 391 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 DPH2Q9BQC3 489 aaPredicted RBP13.77□□□□□ -0.21
SRP54-202ENST00000546080 KATNAL1Q9BW62 490 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 TRAPPC4Q9Y296 219 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 ZNF451Q9Y4E5 1061 aa13.77□□□□□ -0.21
SRP54-202ENST00000546080 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 PDHXO00330 501 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ALX3O95076 343 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 COL6A1P12109 1028 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 SDC1P18827 310 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 DGKAP23743 735 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 MAPK1P28482 360 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 KIR3DL1P43629 444 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 CPT1AP50416 773 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 CRISP3P54108 245 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 E2F2Q14209 437 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 DUOXA1Q1HG43 343 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ARMC4Q5T2S8 1044 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 MSANTD1Q6ZTZ1 278 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ZNF367Q7RTV3 350 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 PTOV1Q86YD1 416 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 GPR152Q8TDT2 470 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 UBTD2Q8WUN7 234 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 NEDD4LQ96PU5 975 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 PHOX2BQ99453 314 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
SRP54-202ENST00000546080 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 MAU2Q9Y6X3 613 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 DPM1O60762 260 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 AOC2O75106 756 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 UGT2B17O75795 530 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 SEMA3DO95025 777 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 IGLV3-27P01718 113 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ZNF7P17097 686 aaPredicted RBP13.76□□□□□ -0.21
SRP54-202ENST00000546080 HNF4AP41235 474 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ST3GAL4Q11206 333 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 EIF4HQ15056 248 aaKnown RBP13.76□□□□□ -0.21
SRP54-202ENST00000546080 ZNF621Q6ZSS3 439 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 MRPL10Q7Z7H8 261 aaKnown RBP13.76□□□□□ -0.21
SRP54-202ENST00000546080 HOMEZQ8IX15 550 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 LKAAEAR1Q8TD35 194 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 RASSF5Q8WWW0 418 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 TTYH2Q9BSA4 534 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 ABCG8Q9H221 673 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 SLA2Q9H6Q3 261 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 DYRK4Q9NR20 520 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 PAQR5Q9NXK6 330 aaPredicted RBP13.76□□□□□ -0.21
SRP54-202ENST00000546080 PCDHGB3Q9Y5G1 929 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 PCDHGB2Q9Y5G2 931 aa13.76□□□□□ -0.21
SRP54-202ENST00000546080 MAGEB17A8MXT2 336 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 STK16O75716 305 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 PAX3P23760 479 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 GNG2P59768 71 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 ARHGEF7Q14155 803 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TOR1AIP1Q5JTV8 583 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 GNASQ5JWF2 1037 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 FAM209AQ5JX71 171 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 CERS6Q6ZMG9 384 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 DEPDC4Q8N2C3 294 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 UTP15Q8TED0 518 aaKnown RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 C7orf34Q96L11 122 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 FEVQ99581 238 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TSEN34Q9BSV6 310 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms