RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 RHBDL2Q9NX52 303 aa9□□□□□ -0.97
GNE-206ENST00000543356 PCDHGA7Q9Y5G6 932 aa9□□□□□ -0.97
GNE-206ENST00000543356 DGKBQ9Y6T7 804 aa9□□□□□ -0.97
GNE-206ENST00000543356 EYSQ5T1H1 3165 aa9□□□□□ -0.97
GNE-206ENST00000543356 PIPSLA2A3N6 862 aa9□□□□□ -0.97
GNE-206ENST00000543356 CCDC154A6NI56 674 aa9□□□□□ -0.97
GNE-206ENST00000543356 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
GNE-206ENST00000543356 KDM1AO60341 852 aa9□□□□□ -0.97
GNE-206ENST00000543356 LMNAP02545 664 aaKnown RBP9□□□□□ -0.97
GNE-206ENST00000543356 IL12AP29459 219 aa9□□□□□ -0.97
GNE-206ENST00000543356 DPP6P42658 865 aa9□□□□□ -0.97
GNE-206ENST00000543356 RAB28P51157 221 aa9□□□□□ -0.97
GNE-206ENST00000543356 ACTR3P61158 418 aa9□□□□□ -0.97
GNE-206ENST00000543356 TSTA3Q13630 321 aaPredicted RBP9□□□□□ -0.97
GNE-206ENST00000543356 SLBPQ14493 270 aaKnown RBP eCLIP9□□□□□ -0.97
GNE-206ENST00000543356 HIST2H2ACQ16777 129 aaPredicted RBP9□□□□□ -0.97
GNE-206ENST00000543356 VPS26BQ4G0F5 336 aa9□□□□□ -0.97
GNE-206ENST00000543356 PIGGQ5H8A4 983 aa9□□□□□ -0.97
GNE-206ENST00000543356 CATSPEREQ5SY80 951 aa9□□□□□ -0.97
GNE-206ENST00000543356 HIST2H2AA3Q6FI13 130 aa9□□□□□ -0.97
GNE-206ENST00000543356 RIPOR1Q6ZS17 1223 aa9□□□□□ -0.97
GNE-206ENST00000543356 LIX1Q8N485 282 aa9□□□□□ -0.97
GNE-206ENST00000543356 OR13H1Q8NG92 308 aa9□□□□□ -0.97
GNE-206ENST00000543356 OR2L8Q8NGY9 312 aa9□□□□□ -0.97
GNE-206ENST00000543356 CLDN23Q96B33 292 aa9□□□□□ -0.97
GNE-206ENST00000543356 GPATCH1Q9BRR8 931 aaKnown RBP9□□□□□ -0.97
GNE-206ENST00000543356 TBC1D17Q9HA65 648 aa9□□□□□ -0.97
GNE-206ENST00000543356 PRDM8Q9NQV8 689 aa9□□□□□ -0.97
GNE-206ENST00000543356 LEF1Q9UJU2 399 aaPredicted RBP9□□□□□ -0.97
GNE-206ENST00000543356 CROTQ9UKG9 612 aa9□□□□□ -0.97
GNE-206ENST00000543356 ZBTB32Q9Y2Y4 487 aaPredicted RBP9□□□□□ -0.97
GNE-206ENST00000543356 PLXND1Q9Y4D7 1925 aa9□□□□□ -0.97
GNE-206ENST00000543356 A0A1W2PPC4 97 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 A0A1W2PPV9 198 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 ASPDHA6ND91 283 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 FOXE1O00358 373 aaPredicted RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 ENTPD5O75356 428 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 PDE5AO76074 875 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 BCKDHAP12694 445 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 AMD1P17707 334 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 TLR1Q15399 786 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 C1orf146Q5VVC0 180 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 SLC22A18ASQ8N1D0 253 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 SPEM1Q8N4L4 309 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 LMNTD1Q8N9Z9 388 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 SMYD1Q8NB12 490 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 PJA1Q8NG27 643 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 TSACCQ96A04 125 aaPredicted RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 CDRT15Q96T59 188 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 ZBTB18Q99592 522 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 HOPXQ9BPY8 73 aaPredicted RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 ORAI3Q9BRQ5 295 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 KIR3DX1Q9H7L2 352 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 GID8Q9NWU2 228 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 MAP10Q9P2G4 905 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 VPS29Q9UBQ0 182 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 PNMA8BQ9ULN7 279 aaPredicted RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 PPT2Q9UMR5 302 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 NPPAP01160 153 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 PCNAP12004 261 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 CDH1P12830 882 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 NDUFS1P28331 727 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 RPS9P46781 194 aaKnown RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 DYNC1I2Q13409 638 aaKnown RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 PTGR1Q14914 329 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 ZNF423Q2M1K9 1284 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 C17orf64Q86WR6 236 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 FAM129CQ86XR2 697 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 HPS6Q86YV9 775 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 MINDY1Q8N5J2 469 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 DPP10Q8N608 796 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 ENDOVQ8N8Q3 282 aaKnown RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 LINC01555Q8NAE3 123 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 HUS1BQ8NHY5 278 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 APIPQ96GX9 242 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 NAF1Q96HR8 494 aaKnown RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 SLC45A3Q96JT2 553 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 TPSD1Q9BZJ3 242 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 DPY30Q9C005 99 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 PITHD1Q9GZP4 211 aaPredicted RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 CLMPQ9H6B4 373 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 SCHIP1Q9P0W5 487 aaPredicted RBP8.99□□□□□ -0.97
GNE-206ENST00000543356 TBC1D29Q9UFV1 150 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 TAC3Q9UHF0 121 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 POMPQ9Y244 141 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 COLEC10Q9Y6Z7 277 aa8.99□□□□□ -0.97
GNE-206ENST00000543356 A6NCN8 305 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 OR52A4PA6NMU1 304 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 C9JVG2 144 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 FXYD1O00168 92 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 TRIM38O00635 465 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 CFLARO15519 480 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 RASGRP1O95267 797 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 TNFP01375 233 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 PIK3CBP42338 1070 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 CLDN8P56748 225 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 PHEXP78562 749 aa8.98□□□□□ -0.97
GNE-206ENST00000543356 KRT33BQ14525 404 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms