RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TSPAN6O43657 245 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PRPSAP2O60256 369 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 GPRIN2O60269 458 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TSPAN2O60636 221 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 KRT33AO76009 404 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CNTN5O94779 1100 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 OAZ2O95190 189 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ACSL3O95573 720 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TOP3BO95985 862 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 LALBAP00709 142 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 AHSGP02765 367 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RAF1P04049 648 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CNPP09543 421 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MLNP12872 115 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RNH1P13489 461 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FOLR2P14207 255 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DAOP14920 347 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ATF2P15336 505 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CREB1P16220 341 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 POU3F3P20264 500 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MSH3P20585 1137 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SPRP35270 261 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 GPX4P36969 197 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FEN1P39748 380 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RFC3P40938 356 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 STAT5AP42229 794 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MCAMP43121 646 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CRATP43155 626 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 GPR3P46089 330 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CASP4P49662 377 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PLA2G16P53816 162 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 EPHB1P54762 984 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SLC26A5P58743 744 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 STARD6P59095 220 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 KIAA1024LP59773 190 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ABCE1P61221 599 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RPL11P62913 178 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MRPS5P82675 430 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ARHGAP8P85298 464 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 HSF2Q03933 536 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SLC3A1Q07837 685 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ILF3Q12906 894 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ORC2Q13416 577 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 IL18R1Q13478 541 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SMAD4Q13485 552 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ART3Q13508 389 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TFDP2Q14188 446 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DRAP1Q14919 205 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SLC1A5Q15758 541 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TOMM34Q15785 309 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CTF1Q16619 201 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SYT16Q17RD7 645 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ZIK1Q3SY52 487 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PTPN20Q4JDL3 420 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PIGGQ5H8A4 983 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TOR1AIP1Q5JTV8 583 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SPANXN2Q5MJ10 180 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 LIN9Q5TKA1 542 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ARHGAP17Q68EM7 881 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 KDM4DQ6B0I6 523 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CIAPIN1Q6FI81 312 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PRR5LQ6MZQ0 368 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DPY19L2P1Q6NXN4 242 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 KLHL24Q6TFL4 600 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ZPBP2Q6X784 338 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FAM92BQ6ZTR7 304 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FRMD5Q7Z6J6 570 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RABEPKQ7Z6M1 372 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MRPL52Q86TS9 123 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ISCA2Q86U28 154 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TRIM69Q86WT6 500 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SIAH1Q8IUQ4 282 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 GID4Q8IVV7 300 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MCEMP1Q8IX19 187 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CPNE9Q8IYJ1 553 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DEFB107AQ8IZN7 70 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 GHDCQ8N2G8 530 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PRR18Q8N4B5 295 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DHRSXQ8N5I4 330 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 UBR7Q8N806 425 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PRELID2Q8N945 189 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MFSD9Q8NBP5 474 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CHDHQ8NE62 594 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 BPIFB6Q8NFQ5 453 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 IL17REQ8NFR9 667 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 NLGN2Q8NFZ4 835 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 OR6M1Q8NGM8 313 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SPATA22Q8NHS9 363 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ITFG1Q8TB96 612 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FCGR1BQ92637 280 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 USP7Q93009 1102 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CD101Q93033 1021 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RAB24Q969Q5 203 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DCPSQ96C86 337 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 R3HDM4Q96D70 268 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 OTUB2Q96DC9 234 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 RRNAD1Q96FB5 475 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms