RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RNFT2Q96EX2 444 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 MYRFLQ96LU7 910 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 PRDM8Q9NQV8 689 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 PCDHB14Q9Y5E9 798 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 SSC5DA1L4H1 1573 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 NINQ8N4C6 2090 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 WNT9AO14904 365 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ASNA1O43681 348 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 CH25HO95992 272 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 C1QAP02745 245 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 CCDC159P0C7I6 412 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 PAICSP22234 425 aaKnown RBP15.63■□□□□ 0.09
VARS2-212ENST00000542001 PON2Q15165 354 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ZNF554Q86TJ5 538 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 WFDC5Q8TCV5 224 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 SLC7A5P2Q9GIP4 190 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 MUC13Q9H3R2 512 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 GADD45GO95257 159 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 EBLN1P0CF75 366 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 XKR4Q5GH76 650 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 NCEH1Q6PIU2 408 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 DSG4Q86SJ6 1040 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 CNTN4Q8IWV2 1026 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 CNPPD1Q9BV87 410 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 KCNK6Q9Y257 313 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 GPR45Q9Y5Y3 372 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ARID1AO14497 2285 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 SOD2P04179 222 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ACADMP11310 421 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 CLCNKAP51800 687 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 SRSF11Q05519 484 aaKnown RBP15.63■□□□□ 0.09
VARS2-212ENST00000542001 PDCD4Q53EL6 469 aaKnown RBP15.63■□□□□ 0.09
VARS2-212ENST00000542001 SLAIN1Q8ND83 568 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 STARD8Q92502 1023 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 ZNF419Q96HQ0 510 aaPredicted RBP15.63■□□□□ 0.09
VARS2-212ENST00000542001 ARNT2Q9HBZ2 717 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 TRIM39Q9HCM9 518 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 AP3M1Q9Y2T2 418 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 N6AMT1Q9Y5N5 214 aa15.63■□□□□ 0.09
VARS2-212ENST00000542001 SLC9A3R1O14745 358 aaPredicted RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 GNB5O14775 395 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 INMTO95050 263 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 LAMP1P11279 417 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 SLC5A2P31639 672 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 UGT2B15P54855 530 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 RAB8AP61006 207 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 C6orf141Q5SZD1 244 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 TPGS2Q68CL5 300 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 ANKRD34AQ69YU3 496 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 SMARCD3Q6STE5 483 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 CRTC1Q6UUV9 634 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 COX4I2Q96KJ9 171 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 FAM210AQ96ND0 272 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 ZCCHC3Q9NUD5 404 aaKnown RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 TRIP12Q14669 1992 aaPredicted RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 EFCAB9A8MZ26 197 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 LOC110117498-PIK3R3F6TDL0 507 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 SLC10A3P09131 477 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 ACRV1P26436 265 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 TMEM115Q12893 351 aaPredicted RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 DOC2AQ14183 400 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 SNAPC1Q16533 368 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 C2orf15Q8WU43 125 aaKnown RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 RAB2BQ8WUD1 216 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 TAMM41Q96BW9 452 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 PPP1R16AQ96I34 528 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 MTRRQ9UBK8 725 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 CPSF4LA6NMK7 179 aaKnown RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 ACOT8O14734 319 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 ARHGEF9O43307 516 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 ADAMTS4O75173 837 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 AP2A2O94973 939 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 BCHEP06276 602 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 PTPN2P17706 415 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 ZNF140P52738 457 aaPredicted RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 ZNF846Q147U1 533 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 CTSL3PQ5NE16 218 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 C12orf66Q96MD2 445 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 CLSTN3Q9BQT9 956 aa15.62■□□□□ 0.09
VARS2-212ENST00000542001 TMA7Q9Y2S6 64 aaKnown RBP15.62■□□□□ 0.09
VARS2-212ENST00000542001 SLC35F4A4IF30 521 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 SLC16A8O95907 504 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 MTHFD2P13995 350 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 ZNF8P17098 575 aaPredicted RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 VIPR2P41587 438 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 ASMTP46597 345 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 PTSQ03393 145 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 FPGSQ05932 587 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 CD47Q08722 323 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 TARDBPQ13148 414 aaKnown RBP eCLIP15.61■□□□□ 0.09
VARS2-212ENST00000542001 ATP6AP1Q15904 470 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 RNF130Q86XS8 419 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 TCAIMQ8N3R3 496 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 C19orf18Q8NEA5 215 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 USP7Q93009 1102 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 SNTG1Q9NSN8 517 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 C1QTNF3-AMACRE9PGA6 284 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 H7BY64 318 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms