RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 MOSPD3O75425 235 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 RECQL5O94762 991 aaPredicted RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 NADKO95544 446 aaPredicted RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 PDYNP01213 254 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 ITGAMP11215 1152 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 RECQLP46063 649 aaPredicted RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 RPIAP49247 311 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 CLK3P49761 638 aaKnown RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 NEK2P51955 445 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 RPS14P62263 151 aaKnown RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 IL18R1Q13478 541 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 SMN1Q16637 294 aaKnown RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 SMU1Q2TAY7 513 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 PGS1Q32NB8 556 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 RFX4Q33E94 735 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 ARSIQ5FYB1 569 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 PAGE2BQ5JRK9 111 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 SHQ1Q6PI26 577 aaKnown RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 Q6ZVL8 140 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 NCCRP1Q6ZVX7 275 aaPredicted RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 ZNF551Q7Z340 670 aaPredicted RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 GRASPQ7Z6J2 395 aaPredicted RBP12.14□□□□□ -0.47
RNF4-222ENST00000541204 GALNT10Q86SR1 603 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 TSSK3Q96PN8 268 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 NTMT1Q9BV86 223 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 KCNH6Q9H252 994 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 TRPS1Q9UHF7 1281 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 TMPRSS11EQ9UL52 423 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
RNF4-222ENST00000541204 ERN1O75460 977 aaKnown RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 LEFTY1O75610 366 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 LRATO95237 230 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 FGBP02675 491 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 TACR1P25103 407 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 S100A3P33764 101 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ETV3P41162 512 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 HALP42357 657 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 DAPP51397 102 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 TTLL9Q3SXZ7 439 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ZC3H12BQ5HYM0 836 aaKnown RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 GDPD4Q6W3E5 623 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ADIPOR2Q86V24 386 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 TMEM132CQ8N3T6 1108 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 CHCHD4Q8N4Q1 142 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 USP7Q93009 1102 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ECHDC3Q96DC8 303 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 VMP1Q96GC9 406 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 SPHK2Q9NRA0 654 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 GPRC5BQ9NZH0 403 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PMF1-BGLAPU3KQ54 211 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PIKFYVEQ9Y2I7 2098 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 A0A096LPI6 279 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 M0QX08 132 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 SLC22A1O15245 554 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 EFCAB14O75071 495 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 JRKO75564 520 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 WDR47O94967 919 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 FADS2O95864 444 aaKnown RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 PSMB9P28065 219 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PTPN6P29350 595 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 GJA8P48165 433 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 SPINT3P49223 89 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 NCS1P62166 190 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 SLC35A2P78381 396 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 FPGSQ05932 587 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 DNASE1L3Q13609 305 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 GBX1Q14549 363 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 INAQ16352 499 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 DOK6Q6PKX4 331 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 UBE2R2Q712K3 238 aaPredicted RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 HSD11B1LQ7Z5J1 315 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 GALNT13Q8IUC8 556 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 BADQ92934 168 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 IL23AQ9NPF7 189 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ASIC5Q9NY37 505 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PPT2Q9UMR5 302 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 INSL6Q9Y581 213 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 hCG_2039718K7EN88 272 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 TLL1O43897 1013 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 STK16O75716 305 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 BMP4P12644 408 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 PTPN2P17706 415 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ITPKAP23677 461 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 TGFBR1P36897 503 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 MASP1P48740 699 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 ACOX1Q15067 660 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 LYPLAL1Q5VWZ2 237 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 P2RY8Q86VZ1 359 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 CBARPQ8N350 705 aaPredicted RBP12.13□□□□□ -0.47
RNF4-222ENST00000541204 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 SETD9Q8NE22 299 aa12.13□□□□□ -0.47
RNF4-222ENST00000541204 FOXJ1Q92949 421 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms