RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 HPP00738 406 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 HEXBP07686 556 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 UQCRHP07919 91 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 ZGLP1P0C6A0 271 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 SLC35G6P0C7Q6 338 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 SLC12A2P55011 1212 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 ARF3P61204 181 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 CHAF1BQ13112 559 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 PRTGQ2VWP7 1150 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 FHL5Q5TD97 284 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 B3GNTL1Q67FW5 361 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 PPP1R32Q7Z5V6 425 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 SLC26A11Q86WA9 606 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 KBTBD2Q8IY47 623 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 NKAPQ8N5F7 415 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 LMF1Q96S06 567 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 NUDT9Q9BW91 350 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 YIPF2Q9BWQ6 316 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 TGIF2Q9GZN2 237 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 DDX47Q9H0S4 455 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 CLK4Q9HAZ1 481 aaKnown RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 RIC8BQ9NVN3 520 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 CUEDC1Q9NWM3 386 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 TRPC4Q9UBN4 977 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 C19orf25Q9UFG5 118 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-208ENST00000540683 CIDEBQ9UHD4 219 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 FBXL4Q9UKA2 621 aa9.91□□□□□ -0.82
CDCA3-208ENST00000540683 NSG1A0A0A6YYJ2 146 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 DYTNA2CJ06 578 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 SYNDIG1LA6NDD5 238 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 SORBS2O94875 1100 aaKnown RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 UMODP07911 640 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 MCM3P25205 808 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 PSMB5P28074 263 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 EMP2P54851 167 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 CAV1Q03135 178 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 DHX9Q08211 1270 aaKnown RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 CUL1Q13616 776 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 HERC3Q15034 1050 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 DUPD1Q68J44 220 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF425Q6IV72 752 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 FBXO42Q6P3S6 717 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 SUSD1Q6UWL2 747 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 NDUFAF7Q7L592 441 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 PAQR7Q86WK9 346 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 FAM20CQ8IXL6 584 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 CPNE9Q8IYJ1 553 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 STT3BQ8TCJ2 826 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 PPP4R1Q8TF05 950 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 MMABQ96EY8 250 aaPredicted RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 TSPAN17Q96FV3 270 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 PDLIM5Q96HC4 596 aaKnown RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 OR2A5Q96R48 311 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 SPSB2Q99619 263 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 NRTNQ99748 197 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 WDR77Q9BQA1 342 aaPredicted RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 ARL15Q9NXU5 204 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 TSR3Q9UJK0 312 aaKnown RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 C3orf18Q9UK00 162 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 RUVBL2Q9Y230 463 aaKnown RBP9.9□□□□□ -0.82
CDCA3-208ENST00000540683 KLHL20Q9Y2M5 609 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 VWA7Q9Y334 891 aa9.9□□□□□ -0.82
CDCA3-208ENST00000540683 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 EFCAB8A8MWE9 144 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 EIF3HO15372 352 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDCA3-208ENST00000540683 HCRTR1O43613 425 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 NSA2O95478 260 aaKnown RBP9.89□□□□□ -0.83
CDCA3-208ENST00000540683 DDAH2O95865 285 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 NR1D1P20393 614 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 IMPA1P29218 277 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 SLC26A3P40879 764 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 OR1D4P47884 311 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 AGTR2P50052 363 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 HNMTP50135 292 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 CCR8P51685 355 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 MLLT10P55197 1068 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 TBPL1P62380 186 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 MEF2AQ02078 507 aaPredicted RBP9.89□□□□□ -0.83
CDCA3-208ENST00000540683 KLC1Q07866 573 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 RGS1Q08116 209 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 MGAT5Q09328 741 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 PWP1Q13610 501 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 FASTKQ14296 549 aaKnown RBP9.89□□□□□ -0.83
CDCA3-208ENST00000540683 TLR1Q15399 786 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 INPP5JQ15735 1006 aaPredicted RBP9.89□□□□□ -0.83
CDCA3-208ENST00000540683 INAQ16352 499 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 CCSMST1Q4G0I0 132 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 CRB2Q5IJ48 1285 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 SLC6A19Q695T7 634 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF549Q6P9A3 640 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 LCTLQ6UWM7 567 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 ISLR2Q6UXK2 745 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 CYHR1Q6ZMK1 362 aa9.89□□□□□ -0.83
CDCA3-208ENST00000540683 CEP128Q6ZU80 1094 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms