RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 OR1A2Q9Y585 309 aa19.58■□□□□ 0.73
PACSIN3-211ENST00000539589 TBC1D3DA0A087WVF3 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3IA0A087WXS9 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3EA0A087X179 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3KA0A087X1G2 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3FA6NER0 549 aaPredicted RBP19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3LB9A6J9 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 H0YIV9 168 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 VEGFDO43915 354 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 C1orf105O95561 183 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3HP0C7X1 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 GGT1P19440 569 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 MAT2AP31153 395 aaKnown RBP19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TRIM23P36406 574 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 PLOD1Q02809 727 aaPredicted RBP19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 RUNDC3AQ59EK9 446 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3GQ6DHY5 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3CQ6IPX1 549 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 KIAA1161Q6NSJ0 714 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 NOXRED1Q6NXP6 359 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 DOK6Q6PKX4 331 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 USP30Q70CQ3 517 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 HORMAD1Q86X24 394 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 TBC1D3Q8IZP1 549 aaPredicted RBP19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 FLCNQ8NFG4 579 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 ITCHQ96J02 903 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 LINC00615Q96LM1 132 aaPredicted RBP19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 CCDC115Q96NT0 180 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 KCNH6Q9H252 994 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 C2orf42Q9NWW7 574 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 VPS29Q9UBQ0 182 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 CIDEBQ9UHD4 219 aa19.58■□□□□ 0.72
PACSIN3-211ENST00000539589 C17orf113A0A1B0GUU1 675 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 FAM149AA5PLN7 773 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 SAC3D1A6NKF1 404 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 ANXA6P08133 673 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 TACR1P25103 407 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 CCT8P50990 548 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 RNF220Q5VTB9 566 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 CRTC3Q6UUV7 619 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 MSRB3Q8IXL7 192 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 FCRL1Q96LA6 429 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 OR4K3Q96R72 315 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 C9orf16Q9BUW7 83 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 FAM192AQ9GZU8 254 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 FZD3Q9NPG1 666 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 C8orf4Q9NR00 106 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 GEMIN8Q9NWZ8 242 aaKnown RBP19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 SLC25A37Q9NYZ2 338 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 GPR34Q9UPC5 381 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 MAN2B2Q9Y2E5 1009 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 KCNE2Q9Y6J6 123 aa19.57■□□□□ 0.72
PACSIN3-211ENST00000539589 A0A096LPI6 279 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 SOCS2O14508 198 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 GSTA4O15217 222 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 POP7O75817 140 aaKnown RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 FAM58BPP0C7Q3 252 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 CDH1P12830 882 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 HSD3B1P14060 373 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 HSD3B2P26439 372 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 ACSL1P33121 698 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 POLE2P56282 527 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PGS1Q32NB8 556 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PRPF38BQ5VTL8 546 aaKnown RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 DNAJC14Q6Y2X3 702 aaPredicted RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 RIMKLAQ8IXN7 391 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 OR10A6Q8NH74 314 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PREBQ9HCU5 417 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 SPATA6Q9NWH7 488 aaPredicted RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 GPRC5BQ9NZH0 403 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 EBF1Q9UH73 591 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PCDHGA11Q9Y5H2 935 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 MAN2B1O00754 1011 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 TNFAIP8O95379 198 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PRPS1L1P21108 318 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 IGFALSP35858 605 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 TPMTP51580 245 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PHC1P78364 1004 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 SGCGQ13326 291 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 ATP6AP1Q15904 470 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 LRIF1Q5T3J3 769 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 MSANTD1Q6ZTZ1 278 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 CBR4Q8N4T8 237 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PHC3Q8NDX5 983 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 METTL2AQ96IZ6 378 aaKnown RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 MTERF1Q99551 399 aaKnown RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 SEPHS2Q99611 448 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PAIP1Q9H074 479 aaKnown RBP19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 GORASP2Q9H8Y8 452 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 BRF2Q9HAW0 419 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 SGK2Q9HBY8 427 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 INVSQ9Y283 1065 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 PCDHB14Q9Y5E9 798 aa19.56■□□□□ 0.72
PACSIN3-211ENST00000539589 TRBV5-3A0A0A0MS03 114 aa19.55■□□□□ 0.72
PACSIN3-211ENST00000539589 PRMT3O60678 531 aa19.55■□□□□ 0.72
PACSIN3-211ENST00000539589 FUCA1P04066 466 aa19.55■□□□□ 0.72
PACSIN3-211ENST00000539589 ACADMP11310 421 aa19.55■□□□□ 0.72
PACSIN3-211ENST00000539589 TEAD1P28347 426 aa19.55■□□□□ 0.72
PACSIN3-211ENST00000539589 FZD5Q13467 585 aa19.55■□□□□ 0.72
PACSIN3-211ENST00000539589 GAS6Q14393 721 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms