RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SIRPGQ9P1W8 387 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SRRDQ9UH36 339 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ZDHHC2Q9UIJ5 367 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UTS2RQ9UKP6 389 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MID1O15344 667 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SNAPC5O75971 98 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 C8BP07358 591 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ACRP10323 421 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 BMP8BP34820 402 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CTSOP43234 321 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CLCNKAP51800 687 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 AQP4P55087 323 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MVKQ03426 396 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 GPR68Q15743 365 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CCL14Q16627 93 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 P4HA3Q7Z4N8 544 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 BMP8AQ7Z5Y6 402 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CLIP4Q8N3C7 705 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 C1orf216Q8TAB5 229 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 KIAA1191Q96A73 305 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 NLE1Q9NVX2 485 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ALKBH4Q9NXW9 302 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MED11Q9P086 117 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 C19orf25Q9UFG5 118 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TBC1D24Q9ULP9 559 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 DPPA5A6NC42 116 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF670-ZNF695F2Z2N8 137 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 H0YGN5 161 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 DNM1LO00429 736 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ITM2AO43736 263 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM63AO94886 807 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TBX18O95935 607 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ACTR1BP42025 376 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ACTR1AP61163 376 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA3CQ13748 450 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 DSC3Q14574 896 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 LIPJQ5W064 366 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR2T5Q6IEZ7 315 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 C2CD4AQ8NCU7 369 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF548Q8NEK5 533 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR56A1Q8NGH5 318 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR2T29Q8NH02 315 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SNIP1Q8TAD8 396 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ADAD1Q96M93 576 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 A0A1W2PP18 115 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PGLSO95336 258 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 AHSGP02765 367 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ALPIP09923 528 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 HAPLN1P10915 354 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TYRP14679 529 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TOR1AIP1Q5JTV8 583 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 FRMD7Q6ZUT3 714 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 GNPDA2Q8TDQ7 276 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SCLYQ96I15 445 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 BTBD1Q9H0C5 482 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 NKIRAS2Q9NYR9 191 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM5Q9Y2B1 443 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 KLF11O14901 512 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 INPPL1O15357 1258 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 POP7O75817 140 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SLC6A4P31645 630 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 FOXN2P32314 431 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SEPHS1P49903 392 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 EMX2Q04743 252 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TCEAL1Q15170 157 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 LRRC73Q5JTD7 316 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CEACAM20Q6UY09 585 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CILP2Q8IUL8 1156 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SLITRK4Q8IW52 837 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZDHHC14Q8IZN3 488 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZUFSPQ96AP4 578 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 KXD1Q9BQD3 176 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OSBPL7Q9BZF2 842 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 MKS1Q9NXB0 559 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF639Q9UID6 485 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SERTAD3Q9UJW9 196 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 FAM149AA5PLN7 773 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 C9JVG2 144 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 H0YJX3 145 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PLOD2O00469 737 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 S100A6P06703 90 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 KLK3P07288 261 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CD36P16671 472 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 RBM34P42696 430 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR3A3P47888 321 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR3A2P47893 321 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 MXD1Q05195 221 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SLC18A2Q05940 514 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SGCBQ16585 318 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SLC5A11Q8WWX8 675 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 STON2Q8WXE9 905 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 BRI3BPQ8WY22 251 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 RAB7BQ96AH8 199 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CD180Q99467 661 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF717Q9BY31 904 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 EHD1Q9H4M9 534 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms