RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 KIR3DL1P43629 444 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 RPS13P62277 151 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 MRPS21P82921 87 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 TBC1D3GQ6DHY5 549 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 CAPRIN2Q6IMN6 1127 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 TBC1D3CQ6IPX1 549 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 HMBOX1Q6NT76 420 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 DNAJC14Q6Y2X3 702 aaPredicted RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 CHST15Q7LFX5 561 aaPredicted RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 TBC1D3Q8IZP1 549 aaPredicted RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 C1orf52Q8N6N3 182 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 TNIP2Q8NFZ5 429 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 UBE2E3Q969T4 207 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 EME1Q96AY2 570 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 PPWD1Q96BP3 646 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 CCDC115Q96NT0 180 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 SEMA6AQ9H2E6 1030 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 TRIT1Q9H3H1 467 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 RPF2Q9H7B2 306 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
ATL3-203ENST00000538786 TDRKHQ9Y2W6 561 aaKnown RBP14.29□□□□□ -0.12
ATL3-203ENST00000538786 C5orf42Q9H799 3197 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 AKAP10O43572 662 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 TIPRLO75663 272 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 CEACAM5P06731 702 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 BMP2P12643 396 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 ACP5P13686 325 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 GGT1P19440 569 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 OXTRP30559 389 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 ASMTP46597 345 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 CLCNKAP51800 687 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 RAE1P78406 368 aaKnown RBP14.28□□□□□ -0.12
ATL3-203ENST00000538786 MED21Q13503 144 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 CYP2A13Q16696 494 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 GLYATQ6IB77 296 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 USP30Q70CQ3 517 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 TBC1D21Q8IYX1 336 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 TMEM132CQ8N3T6 1108 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 DTWD1Q8N5C7 304 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 ANKFN1Q8N957 763 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 TRPV3Q8NET8 790 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 OR2T12Q8NG77 320 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 ASB12Q8WXK4 309 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 GATA6Q92908 595 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 GFM2Q969S9 779 aaKnown RBP14.28□□□□□ -0.12
ATL3-203ENST00000538786 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 DMRT3Q9NQL9 472 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 SPATA7Q9P0W8 599 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 MAPRE3Q9UPY8 281 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 TSC22D4Q9Y3Q8 395 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 PCDHB14Q9Y5E9 798 aa14.28□□□□□ -0.12
ATL3-203ENST00000538786 H0YJX3 145 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 KCNJ13O60928 360 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 ANXA4P09525 319 aaPredicted RBP14.27□□□□□ -0.12
ATL3-203ENST00000538786 HOXB9P17482 250 aaPredicted RBP14.27□□□□□ -0.12
ATL3-203ENST00000538786 RPL10P27635 214 aaKnown RBP14.27□□□□□ -0.12
ATL3-203ENST00000538786 PTPN6P29350 595 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 MAT2AP31153 395 aaKnown RBP14.27□□□□□ -0.12
ATL3-203ENST00000538786 SOX11P35716 441 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 PIK3CBP42338 1070 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 HSPA13P48723 471 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 FOLH1Q04609 750 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 UGT8Q16880 541 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 GTDC1Q4AE62 458 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 MTX3Q5HYI7 312 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 OR4F3Q6IEY1 312 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 GALNT18Q6P9A2 607 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 AMIGO2Q86SJ2 522 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 PAPD5Q8NDF8 572 aaKnown RBP14.27□□□□□ -0.12
ATL3-203ENST00000538786 OR8J2Q8NGG1 315 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 FAM110BQ8TC76 370 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 DNASE1L2Q92874 299 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 BIRC7Q96CA5 298 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 NSMCE2Q96MF7 247 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 GBP5Q96PP8 586 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 MENTQ9BUN1 341 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 APOOQ9BUR5 198 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 PRM3Q9NNZ6 103 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 AGPAT4Q9NRZ5 378 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 SLC6A13Q9NSD5 602 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 SIRT5Q9NXA8 310 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 ANAPC2Q9UJX6 822 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 RAB26Q9ULW5 256 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 NCKAP1Q9Y2A7 1128 aa14.27□□□□□ -0.12
ATL3-203ENST00000538786 CFAP20Q9Y6A4 193 aaKnown RBP14.27□□□□□ -0.12
ATL3-203ENST00000538786 MAGEA13PA6NCF6 341 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 RFXANKO14593 260 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 GMNNO75496 209 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 FCGR1AP12314 374 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 CDH1P12830 882 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 COX7A2P14406 83 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 ZNF26P17031 533 aaPredicted RBP14.27□□□□□ -0.13
ATL3-203ENST00000538786 FASP25445 335 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 TIA1P31483 386 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATL3-203ENST00000538786 TRPC1P48995 793 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 MAP7Q14244 749 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 ANKRD46Q86W74 232 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 SLC44A3Q8N4M1 653 aa14.27□□□□□ -0.13
ATL3-203ENST00000538786 ZNF548Q8NEK5 533 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms