RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	COPS8	Q99627	209 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	ADI1	Q9BV57	179 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	TSSK1B	Q9BXA7	367 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	CLPB	Q9H078	707 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	OR2AG1	Q9H205	316 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	CCDC68	Q9H2F9	335 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM96A	Q9H5X1	160 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	RMI1	Q9H9A7	625 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	ERVMER34-1	Q9H9K5	563 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	UGT1A7	Q9HAW7	530 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	UGT1A10	Q9HAW8	530 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	UGT1A8	Q9HAW9	530 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	SEMA4G	Q9NTN9	838 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZDHHC18	Q9NUE0	388 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	SLC2A6	Q9UGQ3	507 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	APOBEC3B	Q9UH17	382 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZNHIT2	Q9UHR6	403 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	SLC17A4	Q9Y2C5	497 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	TMEM98	Q9Y2Y6	226 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCDHGA8	Q9Y5G5	932 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCDHGA7	Q9Y5G6	932 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCDHGA6	Q9Y5G7	932 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCDHGA3	Q9Y5H0	932 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	NFS1	Q9Y697	457 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	TEX264	Q9Y6I9	313 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	DOCK9	Q9BZ29	2069 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	RALGAPA1	Q6GYQ0	2036 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TRBV5-4	A0A0C4DH59	114 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZCWPW2	A0A1B0GU75	182 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266		A0A1W2PR77	199 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TMEM202	A6NGA9	273 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR2AG2	A6NM03	316 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266		E5RI56	91 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266		E7ESA3	106 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266		H3BMM5	538 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GOLGA8T	H3BQL2	631 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GAPDHS	O14556	408 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SCAMP1	O15126	338 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	KMO	O15229	486 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GRID2	O43424	1007 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SDC3	O75056	442 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TMEM127	O75204	238 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	AP2A2	O94973	939 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ACSL3	O95573	720 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TNF	P01375	233 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	FTH1	P02794	183 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	CSF2	P04141	144 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ANXA6	P08133	673 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	GSTA2	P09210	222 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR56A5	P0C7T3	313 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ERVK-10	P10266	1014 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ATP1B2	P14415	290 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF7	P17097	686 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PSMA3	P25788	255 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PBLD	P30039	288 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	FOXN2	P32314	431 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MSX2	P35548	267 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	NSG1	P42857	185 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MAGEA4	P43358	317 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	POLD2	P49005	469 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	CLNS1A	P54105	237 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MAGOH	P61326	146 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	IL9R	Q01113	521 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	HHEX	Q03014	270 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TMEM115	Q12893	351 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MALL	Q13021	153 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	BIRC2	Q13490	618 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TMED2	Q15363	201 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ELOC	Q15369	112 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	INSC	Q1MX18	579 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	HSP90AA5P	Q58FG0	334 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF542P	Q5EBM4	170 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	STEAP4	Q687X5	459 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PTRHD1	Q6GMV3	140 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF585A	Q6P3V2	769 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF449	Q6P9G9	518 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PACS1	Q6VY07	963 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	C3orf62	Q6ZUJ4	267 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	DET1	Q7L5Y6	550 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TAF8	Q7Z7C8	310 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	LDB1	Q86U70	411 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	LRRTM4	Q86VH4	590 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SERPINA9	Q86WD7	417 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	LRRC6	Q86X45	466 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	CTAGE3P	Q8IX95	158 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	LMNTD2	Q8IXW0	634 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PIANP	Q8IYJ0	282 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PELI3	Q8N2H9	469 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	SDR16C5	Q8N3Y7	309 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	D2HGDH	Q8N465	521 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	FSTL5	Q8N475	847 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	MINDY1	Q8N5J2	469 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	RASGEF1A	Q8N9B8	481 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR2I1P	Q8NGU4	316 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR1E3	Q8WZA6	343 aa		4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	N4BP2L2	Q92802	583 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	TSACC	Q96A04	125 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-208	ENST00000538266	PGM2	Q96G03	612 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms