RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CCNI2Q6ZMN8 369 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 B4GALNT4Q76KP1 1039 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CPNE8Q86YQ8 564 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 KBTBD2Q8IY47 623 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RASGEF1AQ8N9B8 481 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DEFB124Q8NES8 71 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 FBXO25Q8TCJ0 367 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SLC44A1Q8WWI5 657 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RSC1A1Q92681 617 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 KIAA1191Q96A73 305 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CCDC74AQ96AQ1 378 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ART5Q96L15 291 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 NSMCE3Q96MG7 304 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RHOXF2Q9BQY4 288 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SLC29A3Q9BZD2 475 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 P2RY12Q9H244 342 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CCDC86Q9H6F5 360 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 COPS7BQ9H9Q2 264 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 FZD3Q9NPG1 666 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PRDM9Q9NQV7 894 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 GIMAP4Q9NUV9 329 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 HRASLS2Q9NWW9 162 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ARL15Q9NXU5 204 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF624Q9P2J8 865 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 BTRCQ9Y297 605 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 MYO10Q9HD67 2058 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DOCK4Q8N1I0 1966 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 D6RAR5 112 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PSMD12O00232 456 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PLK4O00444 970 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PEX12O00623 359 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PLD2O14939 933 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 POLR1CO15160 346 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TM9SF1O15321 606 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SPINT1O43278 529 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 UGT1A9O60656 530 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CPNE3O75131 537 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 AVILO75366 819 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PSIP1O75475 530 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TIPRLO75663 272 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DNAJC8O75937 253 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TGDSO95455 350 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 HEXBP07686 556 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ITGA2BP08514 1039 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ZSCAN5DPP0CG00 497 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 APEHP13798 732 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 GFAPP14136 432 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 UGT1A6P19224 532 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 UGT1A1P22309 533 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 VAMP1P23763 118 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 GRK2P25098 689 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PKLRP30613 574 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TLX1P31314 330 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 AHRP35869 848 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ITGA1P56199 1179 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PPP2R2AP63151 447 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TXNL4AP83876 142 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SRSF5Q13243 272 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CSHL1Q14406 222 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SF3B4Q15427 424 aaKnown RBP eCLIP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DEFB133Q30KQ1 61 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CRTC2Q53ET0 693 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TEDDM1Q5T9Z0 273 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 AADACL2Q6P093 401 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CHSY3Q70JA7 882 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ABHD13Q7L211 337 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SPRED1Q7Z699 444 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PPP1R3BQ86XI6 285 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DCBLD1Q8N8Z6 715 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CCDC63Q8NA47 563 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 KYQ8NBH2 561 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 OR13J1Q8NGT2 312 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 BAHD1Q8TBE0 780 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 FBF1Q8TES7 1133 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ABTB1Q969K4 478 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 LINGO1Q96FE5 620 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 MED30Q96HR3 178 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 FAM118BQ9BPY3 351 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM168Q9H0V1 697 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 UGT1A7Q9HAW7 530 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 UGT1A10Q9HAW8 530 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 UGT1A8Q9HAW9 530 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 MRPS30Q9NP92 439 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RIC8BQ9NVN3 520 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 MS4A12Q9NXJ0 267 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 EMC3Q9P0I2 261 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PDP2Q9P2J9 529 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 OPTCQ9UBM4 332 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF69Q9UC07 566 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 NDOR1Q9UHB4 597 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PSME2Q9UL46 239 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SNX6Q9UNH7 406 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 KCNK6Q9Y257 313 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DNAJC16Q9Y2G8 782 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RPH3AQ9Y2J0 694 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 OARD1Q9Y530 152 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 AK5Q9Y6K8 562 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 IGHV1OR21-1A0A087WYE8 117 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ZCWPW2A0A1B0GU75 182 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms