RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 MED28Q9H204 178 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 PRDM12Q9H4Q4 367 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 LTB4R2Q9NPC1 389 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 LRRC72A6NJI9 287 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 PSIP1O75475 530 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 PDGFRAP16234 1089 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 POU1F1P28069 291 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HLA-FP30511 346 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ALDH6A1Q02252 535 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HYAL2Q12891 473 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 GRIK2Q13002 908 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 AMHR2Q16671 573 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 FLYWCH1Q4VC44 716 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 FAM92BQ6ZTR7 304 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 CHMP1BQ7LBR1 199 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 CENPLQ8N0S6 344 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HTR3CQ8WXA8 447 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 GFM1Q96RP9 751 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 MNTQ99583 582 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 SDHCQ99643 169 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 C16orf70Q9BSU1 422 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 APOL5Q9BWW9 433 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 RHOJQ9H4E5 214 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 MRM3Q9HC36 420 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 RNF112Q9ULX5 631 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 CMAHPQ9Y471 501 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 A0A087X1B8 175 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 A0A0G2JPF8 293 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HNRNPCL3B7ZW38 293 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 CD3EAPO15446 510 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 VPS4BO75351 444 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 PLATP00750 562 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HNRNPCL4P0DMR1 293 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ODC1P11926 461 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 AKAP5P24588 427 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 RORCP51449 518 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ARHGDIBP52566 201 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HK3P52790 923 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ADAM15Q13444 863 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 TBCEQ15813 527 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 SWI5Q1ZZU3 235 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 EML3Q32P44 896 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 GALNT5Q7Z7M9 940 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 FAM124AQ86V42 546 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 LPCAT1Q8NF37 534 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ZNF222Q9UK12 451 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 A0A1W2PP18 115 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 RAB19A4D1S5 217 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ATG7O95352 703 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 LCP1P13796 627 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 SP2Q02086 613 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 YWHAHQ04917 246 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 SP140Q13342 867 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ORC1Q13415 861 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 HKDC1Q2TB90 917 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 FAM171A1Q5VUB5 890 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 PDE12Q6L8Q7 609 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 TMPRSS9Q7Z410 1059 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 ADGRD2Q7Z7M1 963 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 UBE2J2Q8N2K1 259 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 PYCR2Q96C36 320 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 KLHL8Q9P2G9 620 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-207ENST00000537408 FABP12A6NFH5 140 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 UPK1AO00322 258 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 MATN4O95460 622 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 RAB10P61026 200 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 PLD1Q13393 1074 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 CTXN3Q4LDR2 81 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 RAB44Q7Z6P3 723 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 GALNT10Q86SR1 603 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 ZC3HC1Q86WB0 502 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 POP5Q969H6 163 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 REPS1Q96D71 796 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 GPR22Q99680 433 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 OR51E2Q9H255 320 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 FBRSL1Q9HCM7 1045 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 CD93Q9NPY3 652 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 A0A1W2PPL8 197 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 HACD1B0YJ81 288 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 FXYD1O00168 92 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 WWP2O00308 870 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 ZNF143P52747 638 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 CDH8P55286 799 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 CYP4F8P98187 520 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 HES5Q5TA89 166 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 C1orf53Q5VUE5 145 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 UTP15Q8TED0 518 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 FRS2Q8WU20 508 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 C18orf25Q96B23 403 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 ZNF285Q96NJ3 590 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 ACOX2Q99424 681 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 ZNF670Q9BS34 389 aa10.57□□□□□ -0.72
CLSTN3-207ENST00000537408 TRIM8Q9BZR9 551 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms