RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 PON2Q15165 354 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 TTC23Q5W5X9 447 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 METTL2BQ6P1Q9 378 aaKnown RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 LRRC70Q7Z2Q7 622 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 CYP2U1Q7Z449 544 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 PARP8Q8N3A8 854 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 NCLNQ969V3 563 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 SDCCAG3Q96C92 435 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 ITCHQ96J02 903 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 MAGED4Q96JG8 741 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 ALPK1Q96QP1 1244 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 CPPED1Q9BRF8 314 aaPredicted RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 WDR37Q9Y2I8 494 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 U3KQV3 271 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 C16orf96A6NNT2 1141 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 TSPAN6O43657 245 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 TIMP2P16035 220 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 HOXB9P17482 250 aaPredicted RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 ALDH4A1P30038 563 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 HPCAL1P37235 193 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 GP2P55259 537 aaKnown RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 LSM3P62310 102 aaKnown RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 DDX39BQ13838 428 aaKnown RBP12.47□□□□□ -0.41
TRIM25-202ENST00000537230 SMU1Q2TAY7 513 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 FRG2Q64ET8 278 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 NECAB2Q7Z6G3 386 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 L3MBTL4Q8NA19 623 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 ING5Q8WYH8 240 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 SLC47A1Q96FL8 570 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 FRG2BQ96QU4 278 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 CEP44Q9C0F1 390 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 ERVW-1Q9UQF0 538 aa12.47□□□□□ -0.41
TRIM25-202ENST00000537230 GNGT2O14610 69 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 XPNPEP2O43895 674 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 E2F6O75461 281 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 CREG1O75629 220 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 RHOP08100 348 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 S100A3P33764 101 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 PPP2R2BQ00005 443 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 IFITM3Q01628 133 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 GRIN2CQ14957 1233 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 CTF1Q16619 201 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 MICU2Q8IYU8 434 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 ZFP90Q8TF47 636 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 LRRC3BQ96PB8 259 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 OSBPL10Q9BXB5 764 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 ENPP5Q9UJA9 477 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 SNX6Q9UNH7 406 aa12.46□□□□□ -0.41
TRIM25-202ENST00000537230 E7EQ34 232 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 KPNA4O00629 521 aaPredicted RBP12.46□□□□□ -0.42
TRIM25-202ENST00000537230 YY2O15391 372 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 GMNNO75496 209 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 SERPINA1P01009 418 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 AMD1P17707 334 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 TMED10P49755 219 aaKnown RBP12.46□□□□□ -0.42
TRIM25-202ENST00000537230 GGTA1PQ4G0N0 100 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 CALHM3Q86XJ0 350 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 ZNF555Q8NEP9 628 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 MUL1Q969V5 352 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 HEPHQ9BQS7 1158 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 DNAJC11Q9NVH1 559 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 KLHL42Q9P2K6 505 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 AASSQ9UDR5 926 aa12.46□□□□□ -0.42
TRIM25-202ENST00000537230 HS6ST1O60243 411 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 ETHE1O95571 254 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 PDHA2P29803 388 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 NRIP1P48552 1158 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
TRIM25-202ENST00000537230 OCA2Q04671 838 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 HENMT1Q5T8I9 393 aaKnown RBP12.45□□□□□ -0.42
TRIM25-202ENST00000537230 NOXRED1Q6NXP6 359 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 SLCO6A1Q86UG4 719 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 RASGEF1AQ8N9B8 481 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 CDC26Q8NHZ8 85 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 CNIH3Q8TBE1 160 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 MCOLN3Q8TDD5 553 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 FAM120BQ96EK7 910 aaKnown RBP12.45□□□□□ -0.42
TRIM25-202ENST00000537230 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 NODALQ96S42 347 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 MROQ9BYG7 248 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 DCAF13Q9NV06 445 aaKnown RBP12.45□□□□□ -0.42
TRIM25-202ENST00000537230 BTBD3Q9Y2F9 522 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 SNX5Q9Y5X3 404 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 WASH3PC4AMC7 463 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 SLC1A7O00341 560 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 CEP290O15078 2479 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 UGT2B11O75310 529 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 SYN1P17600 705 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 VIPR1P32241 457 aa12.45□□□□□ -0.42
TRIM25-202ENST00000537230 RECQLP46063 649 aaPredicted RBP12.45□□□□□ -0.42
TRIM25-202ENST00000537230 BDKRB1P46663 353 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms