RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PPP1R3AQ16821 1122 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 WHAMMP3Q1A5X7 153 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 THEMIS2Q5TEJ8 643 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 GARNL3Q5VVW2 1013 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 PRAMEF13Q5VWM6 474 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 CPZQ66K79 652 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 LCTLQ6UWM7 567 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 SBSNQ6UWP8 590 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 MBOAT1Q6ZNC8 495 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 MRGPREQ86SM8 312 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 NKAPQ8N5F7 415 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 OR56A3Q8NH54 315 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 VPS39Q96JC1 886 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 HIST1H2AHQ96KK5 128 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 C10orf90Q96M02 699 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 SPSB2Q99619 263 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 HIST1H2AJQ99878 128 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 H2AFJQ9BTM1 129 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 ZNF71Q9NQZ8 489 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 ANAPC2Q9UJX6 822 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 TP53TG5Q9Y2B4 290 aa16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 HEMK1Q9Y5R4 338 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-205ENST00000537164 IGLV3-12A0A075B6K2 115 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ARGFXA6NJG6 315 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 VSTM2BA6NLU5 285 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 CXorf49A8MYA2 514 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 H7BY64 318 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 TXNDC9O14530 226 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 HAT1O14929 419 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 WISP3O95389 354 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 IGHEP01854 428 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 TUBB4AP04350 444 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 NPPBP16860 134 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 RRADP55042 308 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 GPX6P59796 221 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 POU4F1Q01851 419 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ATP1A4Q13733 1029 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 SLC9A5Q14940 896 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ATG14Q6ZNE5 492 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 C3orf62Q6ZUJ4 267 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ATL1Q8WXF7 558 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 CDKL2Q92772 493 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 FBXL8Q96CD0 374 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 PRAP1Q96NZ9 151 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 CPNE1Q99829 537 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 SARGQ9BW04 601 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 TRIM54Q9BYV2 358 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ATG10Q9H0Y0 220 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ZNF304Q9HCX3 659 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ACSS2Q9NR19 701 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 ARL15Q9NXU5 204 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 NXT1Q9UKK6 140 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 RUVBL1Q9Y265 456 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 TNRC6AQ8NDV7 1962 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-205ENST00000537164 J3QKU1 62 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 K7EM74 188 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 SLC28A2O43868 658 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 EIF2S1P05198 315 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 OR1D4P47884 311 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 RPS15AP62244 130 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 CSNK1G2P78368 415 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 CDKL1Q00532 357 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 GUCY2DQ02846 1103 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 NAE1Q13564 534 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 FAM53BQ14153 422 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 HKDC1Q2TB90 917 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 CAPN13Q6MZZ7 669 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 C8orf74Q6P047 294 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 C17orf64Q86WR6 236 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 CEP97Q8IW35 865 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 CSNK1A1LQ8N752 337 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 RERGQ96A58 199 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 THAP11Q96EK4 314 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 HAUS8Q9BT25 410 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 ZDHHC18Q9NUE0 388 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 IKZF3Q9UKT9 509 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 CDC14AQ9UNH5 594 aa16.39■□□□□ 0.21
SFSWAP-205ENST00000537164 PIAS1O75925 651 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 MMP11P24347 488 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 OTX2P32243 289 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 MAGEA4P43358 317 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 SOX8P57073 446 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 CHAF1BQ13112 559 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 ZNF460Q14592 562 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 DCAF10Q5QP82 559 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 CAPN12Q6ZSI9 719 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 VN1R4Q7Z5H5 301 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 PPP1R32Q7Z5V6 425 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 PTRH1Q86Y79 214 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 TMEM151BQ8IW70 566 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 DTWD1Q8N5C7 304 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 ABHD11Q8NFV4 315 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 OR4K1Q8NGD4 311 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 ANKRD49Q8WVL7 239 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 TM4SF19Q96DZ7 209 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 CABS1Q96KC9 395 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms