RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CCNYL2Q5T2Q4 361 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 LRIF1Q5T3J3 769 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 STPG1Q5TH74 334 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 KIAA0930Q6ICG6 404 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CAPRIN2Q6IMN6 1127 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 GTF2H2CQ6P1K8 395 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 TUBA1AQ71U36 451 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CHERPQ8IWX8 916 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.16□□□□□ -1.91e-8■■■■■ 36.2
SNHG1-202ENST00000535689 MAML2Q8IZL2 1156 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 BEST3Q8N1M1 668 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SLC39A11Q8N1S5 342 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CNNM3Q8NE01 707 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CCDC26Q8TAB7 109 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 URGCPQ8TCY9 931 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ESR2Q92731 530 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 DNASE1L2Q92874 299 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 NEUROG1Q92886 237 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ARSGQ96EG1 525 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CASD1Q96PB1 797 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 INPP4AQ96PE3 977 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SEPHS2Q99611 448 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 TUBA1CQ9BQE3 449 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 WACQ9BTA9 647 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PITPNM3Q9BZ71 974 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ZBP1Q9H171 429 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 KCNK15Q9H427 330 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 VAT1LQ9HCJ6 419 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 IL1RAPL2Q9NP60 686 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 TRPV5Q9NQA5 729 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 NEUROG3Q9Y4Z2 214 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PCDHGB1Q9Y5G3 927 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 DDX49Q9Y6V7 483 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 BAZ2BQ9UIF8 2168 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 WDR81Q562E7 1941 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 NAV2Q8IVL1 2488 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF638Q14966 1978 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CLUHO75153 1309 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 URB1O60287 2271 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 DOCK6Q96HP0 2047 aa3.15□□□□□ -1.9
SNHG1-202ENST00000535689 COL1A2P08123 1366 aa3.15□□□□□ -1.9
SNHG1-202ENST00000535689 hCG_1809904A0A1W2PP81 198 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 A0A1W2PPE2 198 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 A0A1W2PR64 198 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CLEC18AA5D8T8 446 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 HNRNPCL2B2RXH8 293 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 FAM90A26D6RGX4 464 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 J3KR12 359 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF197O14709 1029 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ZBTB5O15062 677 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 RSL1D1O76021 490 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PAPSS2O95340 614 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 H1F0P07305 194 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 EPCAMP16422 314 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 S1PR1P21453 382 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ACTN2P35609 894 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 AHRP35869 848 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 APOBEC1P41238 236 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 HTR6P50406 440 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 NOVA1P51513 510 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 GAS1P54826 345 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 RPS18P62269 152 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 KIF5AQ12840 1032 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 IRF3Q14653 427 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 NFATC4Q14934 902 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PCLAFQ15004 111 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 KARSQ15046 597 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 SNAPC1Q16533 368 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CDC37Q16543 378 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM266Q2M3C6 531 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ADALQ6DHV7 355 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 LCN10Q6JVE6 187 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 SLC30A6Q6NXT4 461 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PACS1Q6VY07 963 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 HAUS6Q7Z4H7 955 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ECHDC2Q86YB7 292 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 GPALPP1Q8IXQ4 340 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 OR8H2Q8N162 312 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PGBD5Q8N414 524 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 SPEM1Q8N4L4 309 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 C1orf52Q8N6N3 182 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF114Q8NC26 417 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CLEC18CQ8NCF0 446 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 MOSPD2Q8NHP6 518 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 LNX1Q8TBB1 728 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PHF21AQ96BD5 680 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 SCMH1Q96GD3 660 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF479Q96JC4 524 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 EGLN2Q96KS0 407 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CFAP57Q96MR6 1250 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 GAD1Q99259 594 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 DDOQ99489 341 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CMKLR1Q99788 373 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 BAG1Q99933 345 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM175Q9BSA9 504 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 GPR88Q9GZN0 384 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 FAM49AQ9H0Q0 323 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PIGMQ9H3S5 423 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 C8orf33Q9H7E9 229 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms