RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 KLK3P07288 261 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 CDH1P12830 882 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 DLSTP36957 453 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 ARF3P61204 181 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 CSNK1G2P78368 415 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 COL9A2Q14055 689 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 TAF1BQ53T94 588 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 WASHC2DQ5SRD0 308 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 ADCK2Q7Z695 626 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 ABHD11Q8NFV4 315 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 STAG3L4Q8TBR4 150 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 MR1Q95460 341 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 SLC45A3Q96JT2 553 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 GBP5Q96PP8 586 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 EFHD1Q9BUP0 239 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 CHST8Q9H2A9 424 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 DHCR7Q9UBM7 475 aaKnown RBP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 RNF112Q9ULX5 631 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 LHX6Q9UPM6 363 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 V9GYY5 206 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 NCF1BA6NI72 391 aaPredicted RBP21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 NCF1CA8MVU1 366 aaPredicted RBP21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 C21orf140B9A014 251 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 TRIM49D1C9J1S8 452 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 TAPBPO15533 448 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 NCF1P14598 390 aaPredicted RBP21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 TCN2P20062 427 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 SLC6A12P48065 614 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 DNASE1L3Q13609 305 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 GRM7Q14831 915 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 PRTGQ2VWP7 1150 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 ADGRD1Q6QNK2 874 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 THOC6Q86W42 341 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 PLD3Q8IV08 490 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 PDPRQ8NCN5 879 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 PROKR1Q8TCW9 393 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 GPR78Q96P69 363 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 ATOH8Q96SQ7 321 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 RUFY1Q96T51 708 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 TMEM79Q9BSE2 394 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 NDC1Q9BTX1 674 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 VPS11Q9H270 941 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 FETUBQ9UGM5 382 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 SLC22A14Q9Y267 594 aa21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 MRPS18BQ9Y676 258 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-204ENST00000535399 SEC16AO15027 2179 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 KERAO60938 352 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 KLHL2O95198 593 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 SNRPAP09012 282 aaKnown RBP21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 GGT5P36269 586 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 GDF5P43026 501 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 FAM83EQ2M2I3 478 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 C1orf189Q5VU69 101 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 SULT1C3Q6IMI6 304 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 GPR155Q7Z3F1 870 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 TCAIMQ8N3R3 496 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 NEIL2Q969S2 332 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 PTBP2Q9UKA9 531 aaKnown RBP21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 PCDHGA6Q9Y5G7 932 aa21.72■■□□□ 1.07
SFSWAP-204ENST00000535399 ANKRD12Q6UB98 2062 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 ZFYVE26Q68DK2 2539 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 CCDC189A1A4V9 331 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 MED26O95402 600 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 EIF2S1P05198 315 aaKnown RBP21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 CAPN1P07384 714 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 ARSFP54793 590 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 YOD1Q5VVQ6 348 aaPredicted RBP21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 WDR93Q6P2C0 686 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 FAM198BQ6UWH4 519 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 PLD6Q8N2A8 252 aaKnown RBP21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 TTC29Q8NA56 475 aaPredicted RBP21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 OR4K1Q8NGD4 311 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 RHEBL1Q8TAI7 183 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 SLC5A11Q8WWX8 675 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 EXT2Q93063 718 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 DPH2Q9BQC3 489 aaPredicted RBP21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 CUTCQ9NTM9 273 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 TXLNGQ9NUQ3 528 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 WWOXQ9NZC7 414 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 NUDT4Q9NZJ9 180 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 CD274Q9NZQ7 290 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 KCND3Q9UK17 655 aa21.71■■□□□ 1.07
SFSWAP-204ENST00000535399 PCM1Q15154 2024 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 ZNF891A8MT65 544 aaPredicted RBP21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 KATNA1O75449 491 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 WDR47O94967 919 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 SHBGP04278 402 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 ITGAXP20702 1163 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 GLRBP48167 497 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 CCR8P51685 355 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 RPS15AP62244 130 aaKnown RBP21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 ACAP2Q15057 778 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 ERCC6LQ2NKX8 1250 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 CATSPEREQ5SY80 951 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 LGSNQ5TDP6 509 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 TIFABQ6ZNK6 161 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 CSNK1A1LQ8N752 337 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 ZSCAN1Q8NBB4 408 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 UBLCP1Q8WVY7 318 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms