RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 EIF2B3Q9NR50 452 aaKnown RBP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 TSR3Q9UJK0 312 aaKnown RBP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 APCP25054 2843 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 OTOGQ6ZRI0 2925 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 A0A0A6YYC8 382 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 OR5H15A6NDH6 313 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 ARHGEF33A8MVX0 844 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 H3BMM5 538 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 I3L1I5 382 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 MYO1CO00159 1063 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 PRAMEF2O60811 474 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 NIPSNAP2O75323 286 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 ZSCAN5DPP0CG00 497 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 MYBL2P10244 700 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 PKMP14618 531 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 RPL22P35268 128 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 PTGER4P35408 488 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 CA7P43166 264 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 PRDX1Q06830 199 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 ABHD17BQ5VST6 288 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF425Q6IV72 752 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 MRNIPQ6NTE8 343 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 SDCCAG8Q86SQ7 713 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 ZGRF1Q86YA3 2104 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 SLC13A5Q86YT5 568 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 OTUD6BQ8N6M0 293 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 LPGAT1Q92604 370 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 IMMP1LQ96LU5 166 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 TUBB6Q9BUF5 446 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 DRC3Q9H069 523 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 CHST11Q9NPF2 352 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 UTP6Q9NYH9 597 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 STMN3Q9NZ72 180 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 BFARQ9NZS9 450 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 MKL2Q9ULH7 1088 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
CCDC84-208ENST00000534656 DIDO1Q9BTC0 2240 aaKnown RBP13.17□□□□□ -0.3
CCDC84-208ENST00000534656 AP3B1O00203 1094 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 TXNDC9O14530 226 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 PFDN6O15212 129 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 CCNDBP1O95273 360 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 VAPBO95292 243 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ESR1P03372 595 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 CHRM3P20309 590 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ARNTP27540 789 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 HTR1EP28566 365 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 HSD17B2P37059 387 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 EFNA3P52797 238 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 PNLIPRP1P54315 467 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ADARP55265 1226 aaKnown RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 RELAQ04206 551 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 SRSF11Q05519 484 aaKnown RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 RBPJQ06330 500 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 TSTA3Q13630 321 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 FAM53BQ14153 422 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 SYT16Q17RD7 645 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF630Q2M218 657 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ZXDCQ2QGD7 858 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 KLHL38Q2WGJ6 581 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ACSBG2Q5FVE4 666 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ICE2Q659A1 982 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 RPTNQ6XPR3 784 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 GDF7Q7Z4P5 450 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 RERGQ96A58 199 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 FAM136AQ96C01 138 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 MFSD3Q96ES6 412 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 TCF12Q99081 682 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 PKP4Q99569 1192 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 BAG1Q99933 345 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 KIFC1Q9BW19 673 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 FAM114A2Q9NRY5 505 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 GALPQ9UBC7 116 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 TEKT2Q9UIF3 430 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
CCDC84-208ENST00000534656 FBN2P35556 2912 aa13.16□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 CATP04040 527 aaKnown RBP13.15□□□□□ -0.3
CCDC84-208ENST00000534656 C8orf89P0DMQ9 161 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 MAT1AQ00266 395 aaKnown RBP13.15□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 NDUFA9Q16795 377 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 LONRF1Q17RB8 773 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 XKRXQ6PP77 449 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 CES3Q6UWW8 571 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 C4orf22Q6V702 233 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 NEK10Q6ZWH5 1172 aa13.15□□□□□ -0.3
CCDC84-208ENST00000534656 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms