RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 LRRK2Q5S007 2527 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 MAST4O15021 2626 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 GOLGA6L10A0A0M3HER8 536 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 IDSB3KWA1 339 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 H7BY64 318 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 TXNDC9O14530 226 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 MAP2K7O14733 419 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PRPF4O43172 522 aaKnown RBP eCLIP8.48□□□□□ -1.056e-8■■■■■ 28.1
COPB1-211ENST00000534234 ZSCAN12O43309 604 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 HPP00738 406 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 EZRP15311 586 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 PGAM1P18669 254 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 CXCR2P25025 360 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 SKIV2L2P42285 1042 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 EMP2P54851 167 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 MPP1Q00013 466 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 Q0VFX4 171 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PTK6Q13882 451 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 DSG2Q14126 1118 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 C4orf17Q53FE4 359 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 RNASEH2BQ5TBB1 312 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 GARNL3Q5VVW2 1013 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 ISLR2Q6UXK2 745 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PIWIL4Q7Z3Z4 852 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 KCNMB4Q86W47 210 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PLD3Q8IV08 490 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 CPNE9Q8IYJ1 553 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 MCOLN3Q8TDD5 553 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PPP4R1Q8TF05 950 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 EEF1AKMT1Q8WVE0 214 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PRAP1Q96NZ9 151 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 BARD1Q99728 777 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 WDR77Q9BQA1 342 aaPredicted RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 FAM167BQ9BTA0 163 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 AARSD1Q9BTE6 412 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 ZNF160Q9HCG1 818 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PCYOX1Q9UHG3 505 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 TRMT6Q9UJA5 497 aaKnown RBP8.48□□□□□ -1.05
COPB1-211ENST00000534234 NTNG1Q9Y2I2 539 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 PCDHGA10Q9Y5H3 936 aa8.48□□□□□ -1.05
COPB1-211ENST00000534234 SEC16AO15027 2179 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 PTPN13Q12923 2485 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 A0A0A6YYC8 382 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 NSG1A0A0A6YYJ2 146 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 ANKUB1A6NFN9 424 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 I3L1I5 382 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 EIF3FO00303 357 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 FFAR3O14843 346 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 HAT1O14929 419 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 GPR42O15529 346 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 FOXS1O43638 330 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 KLHL18O94889 574 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 TTC4O95801 387 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 AHSGP02765 367 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 HEXBP07686 556 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 ANXA5P08758 320 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 GABRB3P28472 473 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 IMPA1P29218 277 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 SLC26A3P40879 764 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 FAM53BQ14153 422 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 CRYMQ14894 314 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 FAAH2Q6GMR7 532 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 UGT3A1Q6NUS8 523 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 LINC00696Q6ZRV3 163 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 NDUFAF7Q7L592 441 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 PALM2Q8IXS6 379 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 KBTBD2Q8IY47 623 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 ARHGEF39Q8N4T4 335 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 AMER3Q8N944 861 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 C2CD4AQ8NCU7 369 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 GABPB2Q8TAK5 448 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 CNDP1Q96KN2 507 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 CCDC138Q96M89 665 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 LMF1Q96S06 567 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 NDNQ99608 321 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 TGIF2Q9GZN2 237 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 DRC3Q9H069 523 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 DDX47Q9H0S4 455 aaKnown RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 EPS8L2Q9H6S3 715 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 MKKSQ9NPJ1 570 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 CCDC177Q9NQR7 707 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 AGPAT4Q9NRZ5 378 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 TMEM184CQ9NVA4 438 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 TRMT1Q9NXH9 659 aaKnown RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 TAS2R13Q9NYV9 303 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 PLEKHB1Q9UF11 243 aaPredicted RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 ASIC3Q9UHC3 531 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 SNX12Q9UMY4 172 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 NOVA2Q9UNW9 492 aaKnown RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 PDE10AQ9Y233 779 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 TNRC6AQ8NDV7 1962 aaKnown RBP8.47□□□□□ -1.05
COPB1-211ENST00000534234 PIKFYVEQ9Y2I7 2098 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 MED13Q9UHV7 2174 aa8.47□□□□□ -1.05
COPB1-211ENST00000534234 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.05
COPB1-211ENST00000534234 CES2O00748 559 aa8.46□□□□□ -1.06
COPB1-211ENST00000534234 DNALI1O14645 258 aaPredicted RBP8.46□□□□□ -1.06
COPB1-211ENST00000534234 BANF1O75531 89 aa8.46□□□□□ -1.06
COPB1-211ENST00000534234 DDAH2O95865 285 aa8.46□□□□□ -1.06
COPB1-211ENST00000534234 COX6A1P12074 109 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms