RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 C17orf62Q9BQA9 187 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 SELENOSQ9BQE4 189 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 SPATA16Q9BXB7 569 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 CAB39LQ9H9S4 337 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZBTB20Q9HC78 741 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 OLAHQ9NV23 265 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 NFKBIL1Q9UBC1 381 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 CRLS1Q9UJA2 301 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 VPS9D1Q9Y2B5 631 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 CRYL1Q9Y2S2 319 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 VWA7Q9Y334 891 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 FBN3Q75N90 2809 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 OR52A4PA6NMU1 304 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 AGAP14A8MT82 685 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 FADS2P1A8MWK0 482 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 KMOO15229 486 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 VEGFDO43915 354 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 OR1I1O60431 355 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 CD99P14209 185 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF7P17097 686 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 AGXTP21549 392 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 IDSP22304 550 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 RPL10P27635 214 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 MAGEA12P43365 314 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 SERPINB8P50452 374 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 GYS2P54840 703 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 TAS2R39P59534 338 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 POU4F1Q01851 419 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ITGA9Q13797 1035 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 MPP2Q14168 576 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 HENMT1Q5T8I9 393 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 RNF187Q5TA31 235 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 XKRXQ6PP77 449 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 CMC1Q7Z7K0 106 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 TRAM1L1Q8N609 369 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ARFGAP2Q8N6H7 521 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 BCORP1Q8N888 145 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 BANPQ8N9N5 519 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ACMSDQ8TDX5 336 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 CHTF18Q8WVB6 975 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ISL2Q96A47 359 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ALKBH8Q96BT7 664 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 ULK4Q96C45 1275 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 NDNQ99608 321 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 AARSD1Q9BTE6 412 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 OR2AG1Q9H205 316 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 SYTL2Q9HCH5 934 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 TRIM39Q9HCM9 518 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 SSU72Q9NP77 194 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 SNX15Q9NRS6 342 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 PCMTD2Q9NV79 361 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMPRSS11EQ9UL52 423 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 CORO1CQ9ULV4 474 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 DNAJC16Q9Y2G8 782 aa10.88□□□□□ -0.67
TRAPPC4-213ENST00000533149 COPEO14579 308 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 PRMT5O14744 637 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CHUKO15111 745 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 TYROBPO43914 113 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 C2P06681 752 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CD63P08962 238 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 DRD2P14416 443 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 PKMP14618 531 aaKnown RBP10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 VCLP18206 1134 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 ACRV1P26436 265 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CRABP2P29373 138 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 GMPRP36959 345 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CCNFP41002 786 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 HALP42357 657 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 PGGT1BP53609 377 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC12A2P55011 1212 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CDKN2DP55273 166 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 TLR1Q15399 786 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CRTC3Q6UUV7 619 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 LRRTM4Q86VH4 590 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 CEP97Q8IW35 865 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 GBP5Q96PP8 586 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 OLFM1Q99784 485 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZSCAN5AQ9BUG6 496 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC7A5P2Q9GIP4 190 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 P2RY12Q9H244 342 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 VPS11Q9H270 941 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 ACTR5Q9H9F9 607 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 MCCC2Q9HCC0 563 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 SOHLH2Q9NX45 425 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 P4HTMQ9NXG6 502 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZDHHC3Q9NYG2 299 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC23A2Q9UGH3 650 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 PKDREJQ9NTG1 2253 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 FER1L5A0AVI2 2057 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 PIKFYVEQ9Y2I7 2098 aa10.87□□□□□ -0.67
TRAPPC4-213ENST00000533149 A0A096LPK6 155 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 TRGV8A0A0C4DH27 118 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMEM120BA0PK00 339 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 OR5K3A6NET4 321 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CCL21O00585 134 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 PCDH17O14917 1159 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms