RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CCDC80Q76M96 950 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 TMEM125Q96AQ2 219 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 ZNF641Q96N77 438 aaPredicted RBP14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 C11orf16Q9NQ32 467 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 RAB26Q9ULW5 256 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 NOX1Q9Y5S8 564 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 GRID2O43424 1007 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 CLEC3AO75596 197 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 SEMA3DO95025 777 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 C9P02748 559 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 SMARCD3Q6STE5 483 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 PLET1Q6UQ28 207 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 TTC9BQ8N6N2 239 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 POLR2J3Q9H1A7 115 aaKnown RBP14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 OR51V1Q9H2C8 321 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 PCDHGB1Q9Y5G3 927 aa14.39□□□□□ -0.11
PCDHA9-202ENST00000532602 A0A0X1KG70 313 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ANXA2P2A6NMY6 339 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ITGB1P05556 798 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ANXA2P07355 339 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 GLDCP23378 1020 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 HOXA11P31270 313 aaPredicted RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ETV3P41162 512 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 DSTNP60981 165 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 SCARB2Q14108 478 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 DECR1Q16698 335 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 RNASE12Q5GAN4 147 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 PERM1Q5SV97 790 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 QSOX2Q6ZRP7 698 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 CMTR2Q8IYT2 770 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 PNPLA2Q96AD5 504 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 CHCHD6Q9BRQ6 235 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 LRRC3Q9BY71 257 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 UBAP1Q9NZ09 502 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 BTAF1O14981 1849 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 FAM221BA6H8Z2 402 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 FAM214AQ32MH5 1076 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 SLC9A4Q6AI14 798 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 THOC6Q86W42 341 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 PDCD5O14737 125 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 RAP2AP10114 183 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ALDH3A2P51648 485 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 WNT7BP56706 349 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 GALNT2Q10471 571 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 OR2L5Q8NG80 312 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 OR10H4Q8NGA5 316 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ACSL5Q9ULC5 683 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 SOCS5O75159 536 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 DBIP07108 87 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 DNAJB1P25685 340 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 NTHL1P78549 312 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 TARDBPQ13148 414 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 C6orf52Q5T4I8 152 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 FBXO46Q6PJ61 603 aaPredicted RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 AHSA2Q719I0 299 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 FAM13CQ8NE31 585 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 FZD3Q9NPG1 666 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 ACVR2AP27037 513 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 IL18Q14116 193 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 GANABQ14697 944 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 C5orf22Q49AR2 442 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 CLLU1OSQ5K130 101 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 RBM44Q6ZP01 1051 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 TCF7L1Q9HCS4 588 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 KLRF1Q9NZS2 232 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 NCDNQ9UBB6 729 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 DNAJB9Q9UBS3 223 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 B4GALT6Q9UBX8 382 aa14.38□□□□□ -0.11
PCDHA9-202ENST00000532602 FAM240BA0A1B0GVZ2 78 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 TIMP1P01033 207 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 EPOP01588 193 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 CA3P07451 260 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 SHMT2P34897 504 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 RAB6CQ53S08 254 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 LINC00471Q8N535 108 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 COL21A1Q96P44 957 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 BHLHE41Q9C0J9 482 aaPredicted RBP14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 RAB6CQ9H0N0 254 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 SPATA6Q9NWH7 488 aaPredicted RBP14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 PCDHGA2Q9Y5H1 932 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 ALS2Q96Q42 1657 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 PAK4O96013 591 aaPredicted RBP14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 C8orf89P0DMQ9 161 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 GSTM3P21266 225 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 KCNJ5P48544 419 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 VLDLRP98155 873 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 MADCAM1Q13477 382 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 PRRT3Q5FWE3 981 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 SLCO6A1Q86UG4 719 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 CBR4Q8N4T8 237 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 C7orf57Q8NEG2 295 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 SLC25A36Q96CQ1 311 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 TACSTD2P09758 323 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 MEF2AQ02078 507 aaPredicted RBP14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 TMEM198Q66K66 360 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 ADNP2Q6IQ32 1131 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 GPALPP1Q8IXQ4 340 aa14.37□□□□□ -0.11
PCDHA9-202ENST00000532602 TRPV5Q9NQA5 729 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms