RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GPC4O75487 556 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 NDUFS3O75489 264 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 FKBP9O95302 570 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 CD99P14209 185 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 CD1EP15812 388 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 AOAHP28039 575 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 SLC26A3P40879 764 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 AVPR1BP47901 424 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 RWDD2BP57060 319 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 TUBA3CQ13748 450 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 DSG2Q14126 1118 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 SEMA3AQ14563 771 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 TCEAL1Q15170 157 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 OR1C1Q15619 314 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 MEP1AQ16819 746 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 TSTD2Q5T7W7 516 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 KCTD11Q693B1 232 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 TUBA3EQ6PEY2 450 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 LANCL3Q6ZV70 420 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 OTOAQ7RTW8 1153 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 GALNTL5Q7Z4T8 443 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 CPEB2Q7Z5Q1 589 aaKnown RBP8.75□□□□□ -1.01
NEDD8-206ENST00000531430 LINC00523Q86TU6 105 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 TMEM200AQ86VY9 491 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 FAM98AQ8NCA5 519 aaKnown RBP8.75□□□□□ -1.01
NEDD8-206ENST00000531430 OR2A1Q8NGT9 310 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 MAGEC3Q8TD91 643 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 FAM136AQ96C01 138 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 C14orf79Q96F83 325 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 POM121Q96HA1 1249 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 IMMP1LQ96LU5 166 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 CYTH2Q99418 400 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 RNF32Q9H0A6 362 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 R3HDM2Q9Y2K5 976 aaKnown RBP8.75□□□□□ -1.01
NEDD8-206ENST00000531430 PCDHA3Q9Y5H8 950 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 PCDHA13Q9Y5I0 950 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 SPG11Q96JI7 2443 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 AKAP9Q99996 3911 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 MAP1AP78559 2803 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 IGLV3-12A0A075B6K2 115 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 A0A0U1RQJ8 604 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 AKR1B15C9JRZ8 316 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 PRMT5O14744 637 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 MFAP3LO75121 409 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 SUN1O94901 812 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 SLCO2B1O94956 709 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 TSPAN12O95859 305 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 SYF2O95926 243 aaKnown RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 SP1P08047 785 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 ADRA1DP25100 572 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 FMO4P31512 558 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 EIF3BP55884 814 aaKnown RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 CDH17Q12864 832 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 SPA17Q15506 151 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 NDUFA9Q16795 377 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 PRTGQ2VWP7 1150 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 P3H1Q32P28 736 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 THEMIS2Q5TEJ8 643 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 SLC25A25Q6KCM7 469 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 TMEM205Q6UW68 189 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 RNF44Q7L0R7 432 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 DOLPP1Q86YN1 238 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 CRLF3Q8IUI8 442 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 PLD3Q8IV08 490 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 HORMAD2Q8N7B1 307 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 AMER3Q8N944 861 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 TMEM178AQ8NBL3 297 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 OR13J1Q8NGT2 312 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 OR9A4Q8NGU2 314 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 THAP3Q8WTV1 239 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 MRFAP1L1Q96HT8 127 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF778Q96MU6 729 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 PANX3Q96QZ0 392 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 TMEM121Q9BTD3 319 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 UCK2Q9BZX2 261 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 DRC3Q9H069 523 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 CDCP1Q9H5V8 836 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 CATSPERZQ9NTU4 200 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 UTP6Q9NYH9 597 aaKnown RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 HCN3Q9P1Z3 774 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 C19orf25Q9UFG5 118 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 PCYOX1Q9UHG3 505 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF835Q9Y2P0 537 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 MRFAP1Q9Y605 127 aa8.74□□□□□ -1.01
NEDD8-206ENST00000531430 NIPBLQ6KC79 2804 aaeCLIP8.74□□□□□ -1.01
NEDD8-206ENST00000531430 CACNA1CQ13936 2221 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 LOC102723996A0A087X1L8 192 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 A0A1W2PPV9 198 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 OR2A25A4D2G3 310 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 NKX2-6A6NCS4 301 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 FAM90A27PA6NNH2 459 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 TXNDC9O14530 226 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 NDC80O14777 642 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 KPNA5O15131 536 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 CD3EAPO15446 510 aaKnown RBP8.73□□□□□ -1.01
NEDD8-206ENST00000531430 FOXS1O43638 330 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 CDC40O60508 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
NEDD8-206ENST00000531430 PDE9AO76083 593 aa8.73□□□□□ -1.01
NEDD8-206ENST00000531430 TPOP07202 933 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms