RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CLMPQ9H6B4 373 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 MAGIXQ9H6Y5 334 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GORASP2Q9H8Y8 452 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 NANOGQ9H9S0 305 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PIDD1Q9HB75 910 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ITM2CQ9NQX7 267 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 MBNL3Q9NUK0 354 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 SIRT5Q9NXA8 310 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 THEGQ9P2T0 379 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 DEC1Q9P2X7 70 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PACSIN3Q9UKS6 424 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CNOT6Q9ULM6 557 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 PPT2Q9UMR5 302 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GPR34Q9UPC5 381 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CORO2BQ9UQ03 480 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RUVBL1Q9Y265 456 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 TSC22D4Q9Y3Q8 395 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 POLR3HQ9Y535 204 aaPredicted RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 ASB1Q9Y576 335 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PTGDR2Q9Y5Y4 395 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GMEB1Q9Y692 573 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 AP4B1Q9Y6B7 739 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 WNT6Q9Y6F9 365 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 MUC22E2RYF6 1773 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 DNAH12Q6ZR08 3092 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 KIAA1549LQ6ZVL6 1849 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TCRBV5S2A0A599 114 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 DPPA5A6NC42 116 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ZNF839A8K0R7 811 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TTC34A8MYJ7 566 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 FAM220BPB1ANY3 271 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LOC730098B7Z3J9 87 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TXNDC9O14530 226 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 CLGNO14967 610 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 AREL1O15033 823 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 AKAP10O43572 662 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 SGTAO43765 313 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RNASEH1O60930 286 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 RECQL5O94762 991 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 PRSS23O95084 383 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 HPRP00739 348 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LDLRP01130 860 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RPN2P04844 631 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PGRP06401 933 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RNASE1P07998 156 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 ANXA6P08133 673 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RAP2AP10114 183 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 BCKDHAP12694 445 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 CD1EP15812 388 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 EPCAMP16422 314 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 CEBPBP17676 345 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 DDX5P17844 614 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 GGT1P19440 569 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 SERPINB1P30740 379 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 S100A3P33764 101 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RPL5P46777 297 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 NRIP1P48552 1158 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 POLE2P56282 527 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 NME5P56597 212 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RPS14P62263 151 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 TUBA4AP68366 448 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PHEXP78562 749 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 HTRA3P83110 453 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ID3Q02535 119 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 IRF8Q02556 426 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 BIRC2Q13490 618 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LAPTM5Q13571 262 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 GTF2H3Q13889 308 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 MYBPC3Q14896 1274 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PTPRRQ15256 657 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 CYP51A1Q16850 503 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LRRC36Q1X8D7 754 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PTCHD3Q3KNS1 767 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TMEM52BQ4KMG9 183 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 RFTN2Q52LD8 501 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 FAM98BQ52LJ0 330 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 USP39Q53GS9 565 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 SPIN4Q56A73 249 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PAGE2BQ5JRK9 111 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 PAGE3Q5JUK9 113 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 TMEM215Q68D42 235 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 GRHL2Q6ISB3 625 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ERICH5Q6P6B1 374 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 FBXL19Q6PCT2 694 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 BORAQ6PGQ7 559 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LAYNQ6UX15 382 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 UNC5DQ6UXZ4 953 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 Q6ZVL8 140 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 HSD11B1LQ7Z5J1 315 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 ATG4DQ86TL0 474 aaPredicted RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 CHERPQ8IWX8 916 aaKnown RBP5.39□□□□□ -1.55
PCF11-205ENST00000530906 ADGRG5Q8IZF4 528 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 EID3Q8N140 333 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 LIX1Q8N485 282 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 CPA6Q8N4T0 437 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 SNX31Q8N9S9 440 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 FAM156AQ8NDB6 213 aa5.39□□□□□ -1.55
PCF11-205ENST00000530906 OR2T12Q8NG77 320 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms