RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KIAA1191Q96A73 305 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 PTERQ96BW5 349 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 RHBDF1Q96CC6 855 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 GBP5Q96PP8 586 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 OR2A5Q96R48 311 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 RUFY1Q96T51 708 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 PAFAH2Q99487 392 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 EGFL8Q99944 293 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 SYNPO2LQ9H987 977 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 NMRAL1Q9HBL8 299 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 DHCR7Q9UBM7 475 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 ACOT9Q9Y305 439 aa12.12□□□□□ -0.47
CCDC90B-216ENST00000529856 FER1L5A0AVI2 2057 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 KCNE1BA0A087WTH5 132 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 A0A087X1B8 175 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 HYKKA2RU49 373 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 POC1B-GALNT4F8VUJ3 575 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 RIPK2O43353 540 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 CREG1O75629 220 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 RECKO95980 971 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 EIF2S1P05198 315 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 LTA4HP09960 611 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 MYBL2P10244 700 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 CDH1P12830 882 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 ALAS2P22557 587 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 MSH2P43246 934 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 KCNC1P48547 511 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 SERPINB9P50453 376 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 CSNK1G2P78368 415 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 TGFBIQ15582 683 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 CDKL4Q5MAI5 379 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 C1orf189Q5VU69 101 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 FAM198BQ6UWH4 519 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 TTLL10Q6ZVT0 673 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 TBC1D1Q86TI0 1168 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 ISCA2Q86U28 154 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 THOC6Q86W42 341 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 GPSM1Q86YR5 675 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 KLHDC8AQ8IYD2 350 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 ABHD11Q8NFV4 315 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 OR4K1Q8NGD4 311 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 TTC9Q92623 222 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 UBL7Q96S82 380 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 NLNQ9BYT8 704 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 ACTL8Q9H568 366 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 IGSF5Q9NSI5 407 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 CUTCQ9NTM9 273 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 ZNF180Q9UJW8 692 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 CHD6Q8TD26 2715 aa12.11□□□□□ -0.47
CCDC90B-216ENST00000529856 A0A1B0GX78 115 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 NCF1BA6NI72 391 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 NCF1CA8MVU1 366 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 TXNDC9O14530 226 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 DSCR3O14972 297 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 KRT38O76015 456 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ONECUT2O95948 504 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ALDOAP04075 364 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ITGB2P05107 769 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 PRKAR1AP10644 381 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 NCF1P14598 390 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 TFEBP19484 476 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ITGAXP20702 1163 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 CNTFP26441 200 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 TNFRSF8P28908 595 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 TYK2P29597 1187 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 GGT5P36269 586 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 SLC6A12P48065 614 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 SERPINB8P50452 374 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 CCR8P51685 355 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 EMP3P54852 163 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 RPS15AP62244 130 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 RPS18P62269 152 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 CDC20Q12834 499 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 COL9A2Q14055 689 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ERV3-1Q14264 604 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 C18orf21Q32NC0 220 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 NKAIN1Q4KMZ8 207 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 SULT1C3Q6IMI6 304 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 SYVN1Q86TM6 617 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 PLD3Q8IV08 490 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 GSPT2Q8IYD1 628 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 CENPLQ8N0S6 344 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 TCAIMQ8N3R3 496 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 CSNK1A1LQ8N752 337 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ENDOVQ8N8Q3 282 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 STAG3L4Q8TBR4 150 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 KCTD4Q8WVF5 259 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ISL2Q96A47 359 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 RERGQ96A58 199 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 NXNL1Q96CM4 212 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 THAP11Q96EK4 314 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms