RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 LUZP1Q86V48 1076 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 GHDCQ8N2G8 530 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 CSNK1A1LQ8N752 337 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 ZNF354BQ96LW1 612 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 TGIF2Q9GZN2 237 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 VN1R1Q9GZP7 353 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 LIME1Q9H400 295 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 KCNK13Q9HB14 408 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 FEZ2Q9UHY8 353 aaPredicted RBP17.93■□□□□ 0.46
SSRP1-204ENST00000529002 TSR3Q9UJK0 312 aaKnown RBP17.93■□□□□ 0.46
SSRP1-204ENST00000529002 KLK4Q9Y5K2 254 aa17.93■□□□□ 0.46
SSRP1-204ENST00000529002 MROH6A6NGR9 719 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 METTL18O95568 372 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 MLYCDO95822 493 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 TSPAN12O95859 305 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 GOT2P00505 430 aaKnown RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 ANXA5P08758 320 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 TFF3Q07654 80 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 FOXD4Q12950 439 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 ZNF468Q5VIY5 522 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 H3F3CQ6NXT2 135 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 CPEB2Q7Z5Q1 589 aaKnown RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 CDKL3Q8IVW4 592 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 KLHDC8BQ8IXV7 354 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 CPSF7Q8N684 471 aaKnown RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 ASZ1Q8WWH4 475 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 ZNF559Q9BR84 538 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 UTP23Q9BRU9 249 aaKnown RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 COQ3Q9NZJ6 369 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 IFNKQ9P0W0 207 aa17.92■□□□□ 0.46
SSRP1-204ENST00000529002 TTC7AQ9ULT0 858 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-204ENST00000529002 FLNAP21333 2647 aaKnown RBP17.91■□□□□ 0.46
SSRP1-204ENST00000529002 PRRG2O14669 202 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 P2RX6O15547 441 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 FKBP9O95302 570 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 C1orf105O95561 183 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 CD46P15529 392 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 AOAHP28039 575 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 OC90Q02509 493 aaPredicted RBP17.91■□□□□ 0.46
SSRP1-204ENST00000529002 MFSD4BQ5TF39 518 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 PLAG1Q6DJT9 500 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 DMRTC2Q8IXT2 367 aaPredicted RBP17.91■□□□□ 0.46
SSRP1-204ENST00000529002 RPRMLQ8N4K4 120 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 ARHGEF39Q8N4T4 335 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 OR13J1Q8NGT2 312 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 HDAC10Q969S8 669 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 RAD51AP1Q96B01 352 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 ALS2CR12Q96Q35 445 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 CXXC4Q9H2H0 198 aa17.91■□□□□ 0.46
SSRP1-204ENST00000529002 FAM221AA4D161 298 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 GABRR3A8MPY1 467 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 NEURL1O76050 574 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 TOXO94900 526 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 APOA4P06727 396 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 SP1P08047 785 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 PSMA3P25788 255 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 AP2B1P63010 937 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 CEBPEQ15744 281 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 MAPKAPK3Q16644 382 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 SUSD1Q6UWL2 747 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 Q71RC1 249 aaPredicted RBP17.9■□□□□ 0.46
SSRP1-204ENST00000529002 ZNF534Q76KX8 674 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 CD163Q86VB7 1156 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 CCDC71Q8IV32 467 aaPredicted RBP17.9■□□□□ 0.46
SSRP1-204ENST00000529002 METTL21AQ8WXB1 218 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 IQCDQ96DY2 449 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 CYTH2Q99418 400 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 FOXC2Q99958 501 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 CARD6Q9BX69 1037 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 RAB11FIP5Q9BXF6 653 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 TFR2Q9UP52 801 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 RNF6Q9Y252 685 aa17.9■□□□□ 0.46
SSRP1-204ENST00000529002 IGKV1-8A0A0C4DH67 115 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 PRPF4O43172 522 aaKnown RBP eCLIP17.89■□□□□ 0.45
SSRP1-204ENST00000529002 STK10O94804 968 aaKnown RBP17.89■□□□□ 0.45
SSRP1-204ENST00000529002 TPOP07202 933 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 RFC3P40938 356 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 EMP3P54852 163 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 PPP2R2AP63151 447 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 MEP1AQ16819 746 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 MINDY4Q4G0A6 757 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 SLC25A25Q6KCM7 469 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 AADACL2Q6P093 401 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 PRSS41Q7RTY9 318 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 PAQR7Q86WK9 346 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 TMEM178AQ8NBL3 297 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 OR9A4Q8NGU2 314 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 SKA2Q8WVK7 121 aaPredicted RBP17.89■□□□□ 0.45
SSRP1-204ENST00000529002 MVB12AQ96EY5 273 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 ZNF778Q96MU6 729 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 DNAJC7Q99615 494 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 PLCD4Q9BRC7 762 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 DRC3Q9H069 523 aa17.89■□□□□ 0.45
SSRP1-204ENST00000529002 RTTNQ86VV8 2226 aa17.88■□□□□ 0.45
SSRP1-204ENST00000529002 A0A1B0GTH9 108 aa17.88■□□□□ 0.45
SSRP1-204ENST00000529002 TMEM200CA6NKL6 621 aa17.88■□□□□ 0.45
SSRP1-204ENST00000529002 FAM155BO75949 473 aa17.88■□□□□ 0.45
SSRP1-204ENST00000529002 ZNF24P17028 368 aa17.88■□□□□ 0.45
SSRP1-204ENST00000529002 MSX1P28360 303 aa17.88■□□□□ 0.45
SSRP1-204ENST00000529002 CMPK1P30085 196 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms