RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 MUM1Q2TAK8 710 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 ATP1A1-AS1Q5TC04 95 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 FAM198BQ6UWH4 519 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 LCTLQ6UWM7 567 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 SBSNQ6UWP8 590 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 GPSM1Q86YR5 675 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 LRRC56Q8IYG6 542 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 OR4N4Q8N0Y3 316 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 SPATA6LQ8N4H0 392 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 ANKRD49Q8WVL7 239 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 APOBEC4Q8WW27 367 aaKnown RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TTC9Q92623 222 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 PYCR2Q96C36 320 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 GBP5Q96PP8 586 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 MCMBPQ9BTE3 642 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 UNKQ9C0B0 810 aaKnown RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 ACSS3Q9H6R3 686 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TLK1Q9UKI8 766 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TCFL5Q9UL49 500 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 MAN2B2Q9Y2E5 1009 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 OARD1Q9Y530 152 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 ANKRD12Q6UB98 2062 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 IGKV1-8A0A0C4DH67 115 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 NCF1BA6NI72 391 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-215ENST00000528396 NCF1CA8MVU1 366 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-215ENST00000528396 H3BMH7 237 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 HAT1O14929 419 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 RECKO95980 971 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 FAM87AP0C7U9 286 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 SFTPCP11686 197 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 CDH1P12830 882 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 NCF1P14598 390 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-215ENST00000528396 RELAQ04206 551 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 LY6DQ14210 128 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 CSHL1Q14406 222 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 PPP1R3AQ16821 1122 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 TEX35Q5T0J7 233 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 MROH9Q5TGP6 573 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 ZNF425Q6IV72 752 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 LCN10Q6JVE6 187 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 FBXO42Q6P3S6 717 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 ZNF517Q6ZMY9 492 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-215ENST00000528396 RAB43Q86YS6 212 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 RELL1Q8IUW5 271 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 PLD3Q8IV08 490 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 TCAIMQ8N3R3 496 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 METTL27Q8N6F8 245 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-215ENST00000528396 OR56A3Q8NH54 315 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 THAP4Q8WY91 577 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 EXT2Q93063 718 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 ZNF285Q96NJ3 590 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 SGPP1Q9BX95 441 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 WWOXQ9NZC7 414 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 CD274Q9NZQ7 290 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 IKZF3Q9UKT9 509 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 RNF112Q9ULX5 631 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 CDC14AQ9UNH5 594 aa12.79□□□□□ -0.36
CAPN1-215ENST00000528396 PTRH2Q9Y3E5 179 aaKnown RBP12.79□□□□□ -0.36
CAPN1-215ENST00000528396 A0A087WUV0 522 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-215ENST00000528396 FITM1A5D6W6 292 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 PRPF4O43172 522 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■□□ 17.7
CAPN1-215ENST00000528396 KALRNO60229 2985 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 C1QAP02745 245 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 OTX2P32243 289 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 MSH2P43246 934 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 SERPINB8P50452 374 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 POLE2P56282 527 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 CDKL1Q00532 357 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 ZKSCAN8Q15776 578 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-215ENST00000528396 NDUFA9Q16795 377 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 UGT8Q16880 541 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 PRMT9Q6P2P2 845 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 CCDC91Q7Z6B0 441 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 CMC1Q7Z7K0 106 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 THOC6Q86W42 341 aaKnown RBP12.78□□□□□ -0.36
CAPN1-215ENST00000528396 UHMK1Q8TAS1 419 aaKnown RBP12.78□□□□□ -0.36
CAPN1-215ENST00000528396 SLC5A11Q8WWX8 675 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 THAP11Q96EK4 314 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 TSNARE1Q96NA8 513 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-215ENST00000528396 YIPF2Q9BWQ6 316 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
CAPN1-215ENST00000528396 NMRAL1Q9HBL8 299 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 PRM3Q9NNZ6 103 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 ACOT9Q9Y305 439 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 KCNE2Q9Y6J6 123 aa12.78□□□□□ -0.36
CAPN1-215ENST00000528396 A0A087X1B8 175 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 EXOC1LA0A1B0GW35 172 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 POC1B-GALNT4F8VUJ3 575 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 PEX12O00623 359 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 KRT38O76015 456 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 WDR47O94967 919 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 CD1DP15813 335 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 NPPBP16860 134 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 FBLP22087 321 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms