RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CPNE1Q99829 537 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 HAUS8Q9BT25 410 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 TRIM55Q9BYV6 548 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ATG10Q9H0Y0 220 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZNF304Q9HCX3 659 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 MLXIPLQ9NP71 852 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZNF71Q9NQZ8 489 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 SMYD2Q9NRG4 433 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ARL15Q9NXU5 204 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 TXNDC16Q9P2K2 825 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ANAPC2Q9UJX6 822 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 CDC14AQ9UNH5 594 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 PCDHGB7Q9Y5F8 929 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 FAM159BA6NKW6 160 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 VSTM2BA6NLU5 285 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 KIF2AO00139 706 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 PEX12O00623 359 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC28A2O43868 658 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 CEACAM4O75871 244 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 NPPBP16860 134 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 OTX2P32243 289 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 MAGEA4P43358 317 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 OR1D4P47884 311 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC12A2P55011 1212 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 GPX6P59796 221 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 RPS15AP62244 130 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 CDKL1Q00532 357 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 FAM53BQ14153 422 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC9A5Q14940 896 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 TRADDQ15628 312 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 NKG7Q16617 165 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 FAM69BQ5VUD6 431 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 C8orf74Q6P047 294 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 SBSNQ6UWP8 590 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 CAPN12Q6ZSI9 719 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 COX15Q7KZN9 410 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 ADCK2Q7Z695 626 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 C17orf64Q86WR6 236 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 MMGT1Q8N4V1 131 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 CSNK1A1LQ8N752 337 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 OR56A3Q8NH54 315 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 TSPAN17Q96FV3 270 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 FER1L6-AS2Q96M78 137 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 LRRC1Q9BTT6 524 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 ABCF3Q9NUQ8 709 aa11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 CUEDC1Q9NWM3 386 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 RUVBL1Q9Y265 456 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-209ENST00000528230 TNRC6AQ8NDV7 1962 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 IGLV3-12A0A075B6K2 115 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 CXorf49A8MYA2 514 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 J3QKU1 62 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 HAT1O14929 419 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 PRPF4O43172 522 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■■■■□ 24.1
TRAPPC4-209ENST00000528230 KLHL41O60662 606 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 DNAJB5O75953 348 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 WISP3O95389 354 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 MED26O95402 600 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 C1QAP02745 245 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 UMODP07911 640 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 SAT1P21673 171 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 MMP11P24347 488 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 GRK3P35626 688 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 GP5P40197 560 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 CCL11P51671 97 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 PGGT1BP53609 377 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 CSNK1G2P78368 415 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 GUCY2DQ02846 1103 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 KLRB1Q12918 225 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ATP1A4Q13733 1029 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 NDUFA9Q16795 377 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 PPP1R3AQ16821 1122 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZXDCQ2QGD7 858 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 CPZQ66K79 652 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 MBOAT1Q6ZNC8 495 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ASB18Q6ZVZ8 466 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 PRICKLE2Q7Z3G6 844 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 MRGPREQ86SM8 312 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 PTRH1Q86Y79 214 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ARHGEF39Q8N4T4 335 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 MNS1Q8NEH6 495 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ABHD11Q8NFV4 315 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 OR4K1Q8NGD4 311 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 COL26A1Q96A83 441 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 VPS50Q96JG6 964 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 CABS1Q96KC9 395 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 C10orf90Q96M02 699 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 SPSB2Q99619 263 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 RBBP8Q99708 897 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC25A23Q9BV35 468 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 SARGQ9BW04 601 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 SYNPO2LQ9H987 977 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 LRRC4CQ9HCJ2 640 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 GPAMQ9HCL2 828 aa11.54□□□□□ -0.56
TRAPPC4-209ENST00000528230 SEMA3GQ9NS98 782 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms