RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CCDC138Q96M89 665 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 RUNDC3BQ96NL0 473 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 SLC29A3Q9BZD2 475 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 SOX17Q9H6I2 414 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 IARS2Q9NSE4 1012 aaKnown RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 TMEM184CQ9NVA4 438 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 CTSFQ9UBX1 484 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 KCNE1BA0A087WTH5 132 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 SLC16A5O15375 505 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 NRP2O60462 931 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 KRT38O76015 456 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 MED26O95402 600 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 C8GP07360 202 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 FBLP22087 321 aaKnown RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 ITGA3P26006 1051 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 IVDP26440 423 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 IMPA1P29218 277 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 SLC26A3P40879 764 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 FOXL2P58012 376 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 MPP1Q00013 466 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 KLC1Q07866 573 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 TSTA3Q13630 321 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 DSG2Q14126 1118 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 MORF4L2Q15014 288 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 FHL5Q5TD97 284 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 ATG9BQ674R7 924 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 Q6ZS92 163 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 PALM2Q8IXS6 379 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 CPNE9Q8IYJ1 553 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 CSNK1A1LQ8N752 337 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 OR11G2Q8NGC1 345 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 LRRC39Q96DD0 335 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 C10orf90Q96M02 699 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 AGAP4Q96P64 663 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 CRB3Q9BUF7 120 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 TGIF2Q9GZN2 237 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 LHPPQ9H008 270 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 DDX47Q9H0S4 455 aaKnown RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 C14orf105Q9NVL8 296 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 CORO1CQ9ULV4 474 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 RUVBL1Q9Y265 456 aaKnown RBP12.76□□□□□ -0.37
CAPN1-207ENST00000527189 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
CAPN1-207ENST00000527189 A0A1W2PQ72 361 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 HPP00738 406 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 AHSGP02765 367 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 GNLYP22749 145 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 CCND1P24385 295 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 TIAL1Q01085 375 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 SP140Q13342 867 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 NDUFA9Q16795 377 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 CRB2Q5IJ48 1285 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 SHISA6Q6ZSJ9 500 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 PIWIL4Q7Z3Z4 852 aaKnown RBP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 TMEM151BQ8IW70 566 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 ARHGEF39Q8N4T4 335 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 METTL27Q8N6F8 245 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 PPFIBP2Q8ND30 876 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 PPP4R1Q8TF05 950 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 EEF1AKMT1Q8WVE0 214 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 PSMG3-AS1Q96PY0 264 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 LMF1Q96S06 567 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 DRC3Q9H069 523 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 PARVBQ9HBI1 364 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 MKKSQ9NPJ1 570 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 CCDC177Q9NQR7 707 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 CUEDC1Q9NWM3 386 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-207ENST00000527189 C3orf18Q9UK00 162 aa12.75□□□□□ -0.37
CAPN1-207ENST00000527189 HEATR5BQ9P2D3 2071 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 H7BY64 318 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 CYC1P08574 325 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 ANXA5P08758 320 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 HIST1H2AGP0C0S8 130 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 ACPPP15309 386 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 HIST1H2ADP20671 130 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 FDXRP22570 491 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 CXCR2P25025 360 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 GABRB3P28472 473 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 EMP2P54851 167 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 RPS15AP62244 130 aaKnown RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 FRG1Q14331 258 aaKnown RBP12.74□□□□□ -0.37
CAPN1-207ENST00000527189 HKDC1Q2TB90 917 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 MSS51Q4VC12 460 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 ADCK2Q7Z695 626 aa12.74□□□□□ -0.37
CAPN1-207ENST00000527189 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms