RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 CARD9Q9H257 536 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 TFB2MQ9H5Q4 396 aaKnown RBP4.59□□□□□ -1.67
CD44-220ENST00000525688 EPB41L5Q9HCM4 733 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 NGBQ9NPG2 151 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 PRMT8Q9NR22 394 aaPredicted RBP4.59□□□□□ -1.67
CD44-220ENST00000525688 TRPC4Q9UBN4 977 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 DNAJB4Q9UDY4 337 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 OR14J1Q9UGF5 321 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 MAD2L2Q9UI95 211 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 ITGA11Q9UKX5 1188 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 CCPG1Q9ULG6 757 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 TTC7AQ9ULT0 858 aaPredicted RBP4.59□□□□□ -1.67
CD44-220ENST00000525688 STX8Q9UNK0 236 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 NUDCQ9Y266 331 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 PAM16Q9Y3D7 125 aa4.59□□□□□ -1.67
CD44-220ENST00000525688 STRAPQ9Y3F4 350 aaKnown RBP4.59□□□□□ -1.67
CD44-220ENST00000525688 ITGB4P16144 1822 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ADAMTS7Q9UKP4 1686 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 PALLDQ8WX93 1383 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 A0A087WV48 116 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 IGHV4-28A0A0C4DH34 117 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 BECN2A8MW95 431 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 H0YGN5 161 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SOCS6O14544 535 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SLC30A4O14863 429 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 TIMM23O14925 209 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 MAPK13O15264 365 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SPRY1O43609 319 aaPredicted RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 SPRY3O43610 288 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ZNF821O75541 412 aaPredicted RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 AK1P00568 194 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 MT-ATP6P00846 226 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 GBAP04062 536 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ICAM1P05362 532 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 KRT8P05787 483 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 FGF4P08620 206 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 EPORP19235 508 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 FBLP22087 321 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 ALDH4A1P30038 563 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 CORO1AP31146 461 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 PRKAR2BP31323 418 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SOAT1P35610 550 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 EIF2S3P41091 472 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 FASLGP48023 281 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 RFX2P48378 723 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ENTPD1P49961 510 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 PRRX1P54821 245 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ST8SIA6P61647 398 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ECT2LQ008S8 904 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SPOCK1Q08629 439 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SCGB2A2Q13296 93 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 PPIGQ13427 754 aaKnown RBP eCLIP4.58□□□□□ -1.68
CD44-220ENST00000525688 RAPSNQ13702 412 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SQLEQ14534 574 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 HNF4GQ14541 408 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 EFNB3Q15768 340 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SLC15A2Q16348 729 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 EIF2S3LQ2VIR3 472 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 ODF3L2Q3SX64 289 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 HERC4Q5GLZ8 1057 aaPredicted RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 PLA2G4FQ68DD2 849 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ARHGAP17Q68EM7 881 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 LCN10Q6JVE6 187 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 NOTUMQ6P988 496 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 MOXD1Q6UVY6 613 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 C1orf186Q6ZWK4 172 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 CCDC80Q76M96 950 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 TAOK1Q7L7X3 1001 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 CAMKMTQ7Z624 323 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 AACSQ86V21 672 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 PSTKQ8IV42 348 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 ZNF679Q8IYX0 411 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 CLYBLQ8N0X4 340 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 TMEM199Q8N511 208 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 OR7G3Q8NG95 312 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ADAMTS14Q8WXS8 1223 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 RPL36ALQ969Q0 106 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 SLAMF9Q96A28 289 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SLC25A28Q96A46 364 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 PTERQ96BW5 349 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 C19orf60Q96EN9 201 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 ATP6V1G3Q96LB4 118 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 PRICKLE1Q96MT3 831 aaPredicted RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 RAD9AQ99638 391 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 HNRNPABQ99729 332 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 CAPS2Q9BXY5 557 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 POLR1EQ9GZS1 481 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 TMEM39BQ9GZU3 492 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 IQCGQ9H095 443 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 PIGMQ9H3S5 423 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 DNAJC11Q9NVH1 559 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 SMPD3Q9NY59 655 aaPredicted RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 GDE1Q9NZC3 331 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 C11orf21Q9P2W6 132 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 MALT1Q9UDY8 824 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 FBXW2Q9UKT8 454 aa4.58□□□□□ -1.68
CD44-220ENST00000525688 WBP11Q9Y2W2 641 aaKnown RBP4.58□□□□□ -1.68
CD44-220ENST00000525688 MRC1P22897 1456 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms