RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CABS1Q96KC9 395 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 C10orf90Q96M02 699 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 OR2A5Q96R48 311 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 LRRC1Q9BTT6 524 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 SLC25A23Q9BV35 468 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 SOX17Q9H6I2 414 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZNF304Q9HCX3 659 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 UTP6Q9NYH9 597 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 CTSFQ9UBX1 484 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 RUVBL1Q9Y265 456 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 TNRC6AQ8NDV7 1962 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZNF462Q96JM2 2506 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 FEZF1A0PJY2 475 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 PABPN1LA6NDY0 278 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 NPEPPSL1A6NEC2 478 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 CDC7O00311 574 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 FFAR3O14843 346 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 EIF3HO15372 352 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 GPR42O15529 346 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 P2RX6O15547 441 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 CD63P08962 238 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 EZRP15311 586 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 GPX6P59796 221 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 RAPSNQ13702 412 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 MUM1Q2TAK8 710 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 TCTN3Q6NUS6 607 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 C3orf62Q6ZUJ4 267 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 PPP1R32Q7Z5V6 425 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 MRGPREQ86SM8 312 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 CEP97Q8IW35 865 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 PRSS58Q8IYP2 241 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 ANKRD49Q8WVL7 239 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 RERGQ96A58 199 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 FKBP10Q96AY3 582 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 VPS39Q96JC1 886 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 MACROD1Q9BQ69 325 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 YIPF2Q9BWQ6 316 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 TRIM54Q9BYV2 358 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 UNKQ9C0B0 810 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 RHOJQ9H4E5 214 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 CAB39LQ9H9S4 337 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 ENAMQ9NRM1 1142 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 TMEM184CQ9NVA4 438 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 NSMCE4AQ9NXX6 385 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 ANKRD12Q6UB98 2062 aa12.25□□□□□ -0.45
TRAPPC4-205ENST00000525079 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 TCRBV9S1A1TA0A576 114 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 PEX12O00623 359 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 SEC16AO15027 2179 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 ONECUT2O95948 504 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 CDH1P12830 882 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 NPPBP16860 134 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZNF37AP17032 561 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 MAGEA4P43358 317 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 SNRPNP63162 240 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 CSNK1G2P78368 415 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 CAV1Q03135 178 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 C8orf74Q6P047 294 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 SBSNQ6UWP8 590 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 MED25Q71SY5 747 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 C17orf64Q86WR6 236 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 CTAGE3PQ8IX95 158 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 SPATA6LQ8N4H0 392 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 TMEM102Q8N9M5 508 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 TEX19Q8NA77 164 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 FDCSPQ8NFU4 85 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 CDKL2Q92772 493 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 PDLIM5Q96HC4 596 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 SPSB2Q99619 263 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 MCMBPQ9BTE3 642 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 NUDT9Q9BW91 350 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 SGPP1Q9BX95 441 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 PCBD2Q9H0N5 130 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 P4HTMQ9NXG6 502 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 HEATR5BQ9P2D3 2071 aa12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 MRPS2Q9Y399 296 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-205ENST00000525079 MED13Q9UHV7 2174 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 MDC1Q14676 2089 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 A0A0A6YYC8 382 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 FAM159BA6NKW6 160 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 I3L1I5 382 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 LCMT2O60294 686 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 ALOX12BO75342 701 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 FAM155BO75949 473 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 ALBP02768 609 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 FBLP22087 321 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 PGDP52209 483 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 SLC12A2P55011 1212 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 RRADP55042 308 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 AP1S2P56377 157 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 MEF2AQ02078 507 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 TLE1Q04724 770 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 KLRB1Q12918 225 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 WHAMMP3Q1A5X7 153 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 VWA2Q5GFL6 755 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 CAPN13Q6MZZ7 669 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 PRMT9Q6P2P2 845 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 LCTLQ6UWM7 567 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms