RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RBBP7Q16576 425 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 HKDC1Q2TB90 917 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 PRTGQ2VWP7 1150 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 VWA5B1Q5TIE3 1220 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 MBOAT1Q6ZNC8 495 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 ATCAYQ86WG3 371 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 PLD3Q8IV08 490 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 LRRC56Q8IYG6 542 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 EFCAB3Q8N7B9 438 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 MIB2Q96AX9 1013 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 NACC2Q96BF6 587 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 OR2A5Q96R48 311 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 SMAD5Q99717 465 aaKnown RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 YIPF2Q9BWQ6 316 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 SYNPO2LQ9H987 977 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 PARVBQ9HBI1 364 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 PLAC1Q9HBJ0 212 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 LUZP4Q9P127 313 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 RNF14Q9UBS8 474 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 ZNF282Q9UDV7 671 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 CDC14AQ9UNH5 594 aa17.69■□□□□ 0.42
CAPN1-203ENST00000525013 RUVBL1Q9Y265 456 aaKnown RBP17.69■□□□□ 0.42
CAPN1-203ENST00000525013 ESPL1Q14674 2120 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 PABPN1LA6NDY0 278 aaKnown RBP17.68■□□□□ 0.42
CAPN1-203ENST00000525013 HAT1O14929 419 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 EMP3P54852 163 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 IL2P60568 153 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 TBPL1P62380 186 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 PDIA2Q13087 525 aaKnown RBP17.68■□□□□ 0.42
CAPN1-203ENST00000525013 SP140Q13342 867 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 HECTD2Q5U5R9 776 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 PRAMEF13Q5VWM6 474 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 STEAP4Q687X5 459 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 JMJD6Q6NYC1 403 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-203ENST00000525013 AGTRAPQ6RW13 159 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 GALNT7Q86SF2 657 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 HPS6Q86YV9 775 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 CPT1CQ8TCG5 803 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 STT3BQ8TCJ2 826 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 MIEF2Q96C03 454 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 WDR83Q9BRX9 315 aaKnown RBP17.68■□□□□ 0.42
CAPN1-203ENST00000525013 CRB3Q9BUF7 120 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 PCBD2Q9H0N5 130 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 ATG10Q9H0Y0 220 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 SLAMF7Q9NQ25 335 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 SEMA3GQ9NS98 782 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 VWA7Q9Y334 891 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 SNX24Q9Y343 169 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 HS3ST3B1Q9Y662 390 aa17.68■□□□□ 0.42
CAPN1-203ENST00000525013 SHANK1Q9Y566 2161 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 VSTM2BA6NLU5 285 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 TXNDC9O14530 226 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 SOCS6O14544 535 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 FANCGO15287 622 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 SLC16A5O15375 505 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 KLHL41O60662 606 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 ALOX12BO75342 701 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 STATHP02808 62 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 HIST1H2AGP0C0S8 130 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-203ENST00000525013 ZGLP1P0C6A0 271 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 HIST1H2ADP20671 130 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 ITGA3P26006 1051 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 PGGT1BP53609 377 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 MRPS25P82663 173 aaKnown RBP17.67■□□□□ 0.42
CAPN1-203ENST00000525013 RELAQ04206 551 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 KLC1Q07866 573 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 AIMP2Q13155 320 aaKnown RBP17.67■□□□□ 0.42
CAPN1-203ENST00000525013 NAE1Q13564 534 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 KIRREL2Q6UWL6 708 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 RBMXL3Q8N7X1 1067 aaKnown RBP17.67■□□□□ 0.42
CAPN1-203ENST00000525013 MMABQ96EY8 250 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-203ENST00000525013 VPS50Q96JG6 964 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 HIST1H2AHQ96KK5 128 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 HIST1H2AJQ99878 128 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 H2AFJQ9BTM1 129 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 TMEM184CQ9NVA4 438 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 ZFATQ9P243 1243 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 C5AR2Q9P296 337 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 TRPC4Q9UBN4 977 aa17.67■□□□□ 0.42
CAPN1-203ENST00000525013 CORO1CQ9ULV4 474 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-203ENST00000525013 FFAR3O14843 346 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 GPR42O15529 346 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 P2RX6O15547 441 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 PRPF4O43172 522 aaKnown RBP eCLIP17.66■□□□□ 0.42
CAPN1-203ENST00000525013 ANXA5P08758 320 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 SAT1P21673 171 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 HRH2P25021 359 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 RPL21P46778 160 aaKnown RBP17.66■□□□□ 0.42
CAPN1-203ENST00000525013 MGAT5Q09328 741 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 DSG2Q14126 1118 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 PHKG1Q16816 387 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 TUBB8Q3ZCM7 444 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 VWA2Q5GFL6 755 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 IRAK1BP1Q5VVH5 260 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 GARNL3Q5VVW2 1013 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 SLC6A19Q695T7 634 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 C17orf64Q86WR6 236 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 FBXO36Q8NEA4 188 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 MVB12AQ96EY5 273 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 TRIM54Q9BYV2 358 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms