RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 FOXA1P55317 472 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 GFERP55789 205 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 MEF2AQ02078 507 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 HIST2H2ACQ16777 129 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 KANK2Q63ZY3 851 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 HIST2H2AA3Q6FI13 130 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 CLYBLQ8N0X4 340 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 KRT78Q8N1N4 520 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 BAHD1Q8TBE0 780 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 FAR2Q96K12 515 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 CD180Q99467 661 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 CDC6Q99741 560 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 AIF1LQ9BQI0 150 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 FAM107BQ9H098 131 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 SEMA6CQ9H3T2 930 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 LRRN3Q9H3W5 708 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 PRM3Q9NNZ6 103 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 TMEM184CQ9NVA4 438 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 GEMIN8Q9NWZ8 242 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 ANKMY1Q9P2S6 941 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 KLHL20Q9Y2M5 609 aa15.23■□□□□ 0.03
TSPAN4-213ENST00000524895 MN1Q10571 1320 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 KCNE1BA0A087WTH5 132 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 TLCD2A6NGC4 264 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 SRRM3A6NNA2 597 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 SLCO1B7G3V0H7 640 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 CBFA2T3O75081 653 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 RASSF9O75901 435 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 GP1BAP07359 652 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 TROVE2P10155 538 aaKnown RBP eCLIP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 PVRP15151 417 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 GRIA3P42263 894 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 HK2P52789 917 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 CSNK1G2P78368 415 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 CCL7P80098 99 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 REEP5Q00765 189 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 IFT88Q13099 833 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 E2F2Q14209 437 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 ZRSR2Q15696 482 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 MED27Q6P2C8 311 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 WDR74Q6RFH5 385 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 USP53Q70EK8 1073 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 CPLX4Q7Z7G2 160 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 WDR75Q8IWA0 830 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 CHCHD4Q8N4Q1 142 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 TBC1D19Q8N5T2 526 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 UBE2E3Q969T4 207 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 REPS1Q96D71 796 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 PPM1MQ96MI6 270 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 PLCD4Q9BRC7 762 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 KLHL25Q9H0H3 589 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 EPN3Q9H201 632 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 SPNS1Q9H2V7 528 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 ELOVL6Q9H5J4 265 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 KLHL3Q9UH77 587 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 SNX6Q9UNH7 406 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 TIMM22Q9Y584 194 aa15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 ARID1BQ8NFD5 2236 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-213ENST00000524895 H0YIV9 168 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 HAT1O14929 419 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 TNFSF14O43557 240 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 SKAP2O75563 359 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 CPNE6O95741 557 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 KRT6AP02538 564 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 KRT6BP04259 564 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 PCNAP12004 261 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 SERPINB3P29508 390 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 LSSP48449 732 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 KRT6CP48668 564 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 ACADVLP49748 655 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 SQSTM1Q13501 440 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 PDCD2Q16342 344 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 TCHHL1Q5QJ38 904 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 FAM219BQ5XKK7 198 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 ZNF425Q6IV72 752 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 FIGLAQ6QHK4 219 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 TMIGD1Q6UXZ0 262 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 PAQR7Q86WK9 346 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 FAM129CQ86XR2 697 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 HOMEZQ8IX15 550 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 C19orf47Q8N9M1 422 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 OR4K1Q8NGD4 311 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 TWIST2Q8WVJ9 160 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 ZUFSPQ96AP4 578 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 GFM1Q96RP9 751 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 MAP3K3Q99759 626 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 DPYSL5Q9BPU6 564 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 NUDT22Q9BRQ3 303 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 TRIM55Q9BYV6 548 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 PITHD1Q9GZP4 211 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 NPHS2Q9NP85 383 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 C1GALT1Q9NS00 363 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 VTI1BQ9UEU0 232 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 ATXN7L1Q9ULK2 861 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 PCDHGA11Q9Y5H2 935 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 KLK4Q9Y5K2 254 aa15.21■□□□□ 0.03
TSPAN4-213ENST00000524895 A0A1W2PQM1 296 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms