RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 NETO1Q8TDF5 533 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SH3RF2Q8TEC5 729 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 APH1BQ8WW43 257 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 JPH3Q8WXH2 748 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC7A6Q92536 515 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 EDEM1Q92611 657 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 KCNJ9Q92806 393 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 GGHQ92820 318 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 DNASE1L2Q92874 299 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 KIAA1143Q96AT1 154 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 TESCQ96BS2 214 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 ERLEC1Q96DZ1 483 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 PCED1BQ96HM7 432 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 CDKN2AIPNLQ96HQ2 116 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SENP8Q96LD8 212 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SERPINB11Q96P15 392 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 TRNT1Q96Q11 434 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 HHIPQ96QV1 700 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 PHOX2BQ99453 314 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SDHCQ99643 169 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 ARPC5LQ9BPX5 153 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 C19orf43Q9BQ61 176 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 ACBD6Q9BR61 282 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 TMEM246Q9BRR3 403 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 CDCA4Q9BXL8 241 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 REXO4Q9GZR2 422 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 POLR1EQ9GZS1 481 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 C6orf62Q9GZU0 229 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC22A4Q9H015 551 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 TNKS2Q9H2K2 1166 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 PIF1Q9H611 641 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SP110Q9HB58 689 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 RC3H2Q9HBD1 1191 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 ZBTB20Q9HC78 741 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 KRT84Q9NSB2 600 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 DDX28Q9NUL7 540 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 RNF19AQ9NV58 838 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 EXD2Q9NVH0 621 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 STMN3Q9NZ72 180 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 CNOT2Q9NZN8 540 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 HCSTQ9UBK5 93 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 UXTQ9UBK9 157 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SPASTQ9UBP0 616 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 UBA2Q9UBT2 640 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 ENOPH1Q9UHY7 261 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 EIF2B4Q9UI10 523 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 KLHL21Q9UJP4 597 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 IKZF3Q9UKT9 509 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 TBC1D24Q9ULP9 559 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 NOD1Q9Y239 953 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 TLR6Q9Y2C9 796 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 CRYL1Q9Y2S2 319 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 ARIH1Q9Y4X5 557 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 POLR3HQ9Y535 204 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 PCDHGB3Q9Y5G1 929 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 HS3ST4Q9Y661 456 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 SHROOM3Q8TF72 1996 aa4.81□□□□□ -1.64
CTNNA1-241ENST00000524127 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 LOC105371267A0A1B0GV96 52 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MEIOCA2RUB1 952 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MYBPHLA2RUH7 354 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 OR51F1A6NGY5 319 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 C19orf67A6NJJ6 358 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 DRGXA6NNA5 263 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 B8ZZF3 427 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ENPP3O14638 875 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 STX7O15400 261 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ARHGEF9O43307 516 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PCDHGA12O60330 932 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MPZL2O60487 215 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PRMT3O60678 531 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PRAMEF11O60813 436 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 TMCC2O75069 709 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 LGI1O95970 557 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CA3P07451 260 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HMBSP08397 361 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 EBLN1P0CF75 366 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ODC1P11926 461 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ANXA8P13928 327 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC2A4P14672 509 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GABRB1P18505 474 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PPIBP23284 216 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 AKAP5P24588 427 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PTBP1P26599 531 aaKnown RBP eCLIP4.8□□□□□ -1.642e-6■■□□□ 12.6
CTNNA1-241ENST00000524127 PTPN6P29350 595 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 S100A3P33764 101 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 KDELR2P33947 212 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CA5AP35218 305 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SOX11P35716 441 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PTGER3P43115 390 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 RFX2P48378 723 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MAPKAPK2P49137 400 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HTR6P50406 440 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 AP2S1P53680 142 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CLDN8P56748 225 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 C21orf58P58505 322 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HTRA4P83105 476 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CREMQ03060 361 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ZNF33BQ06732 778 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms