RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CREG1O75629 220 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SLC25A14O95258 325 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 C9P02748 559 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 HLA-DQB2P05538 268 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CD48P09326 243 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ANKRD34CP0C6C1 535 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 PIRTP0C851 137 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 RNF224P0DH78 156 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SKILP12757 684 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ATP1A3P13637 1013 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CA4P22748 312 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 IL4RP24394 825 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 PCK1P35558 622 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 GARSP41250 739 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CD86P42081 329 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SPINT3P49223 89 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 PGDP52209 483 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 PPP1CAP62136 330 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 UBE2IP63279 158 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MYL5Q02045 173 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 NIPAL4Q0D2K0 466 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 KLHL30Q0D2K2 578 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 TUBB3Q13509 450 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 GALNT3Q14435 633 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 IHHQ14623 411 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 KCNAB1Q14722 419 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 EIF2S3LQ2VIR3 472 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 BOLA3Q53S33 107 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 PRR30Q53SZ7 412 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ANKRD20A8PQ5CZ79 823 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ZNF569Q5MCW4 686 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 HENMT1Q5T8I9 393 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CAPRIN2Q6IMN6 1127 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 FAM199XQ6PEV8 388 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SASS6Q6UVJ0 657 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 TMEM26Q6ZUK4 368 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ZNF571Q7Z3V5 609 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 KRT78Q8N1N4 520 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 AVL9Q8NBF6 648 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SIDT2Q8NBJ9 832 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CCNYQ8ND76 341 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 GDAP1Q8TB36 358 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SSC4DQ8WTU2 575 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 DVL3Q92997 716 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CXorf40BQ96DE9 158 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ZDHHC12Q96GR4 267 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MARS2Q96GW9 593 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ERGIC2Q96RQ1 377 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 WDR24Q96S15 920 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SYT11Q9BT88 431 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SLC25A23Q9BV35 468 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MLPHQ9BV36 600 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 TDRD1Q9BXT4 1180 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CARD9Q9H257 536 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ACTL8Q9H568 366 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ZNF768Q9H5H4 540 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 RMI1Q9H9A7 625 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 AKIRIN1Q9H9L7 192 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MRPL47Q9HD33 250 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 PDE7BQ9NP56 450 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 LHX9Q9NQ69 397 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 CHMP5Q9NZZ3 219 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 ZNF624Q9P2J8 865 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SLC23A2Q9UGH3 650 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 DNPEPQ9ULA0 475 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SHOC2Q9UQ13 582 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MED16Q9Y2X0 877 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 USP9XQ93008 2570 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MN1Q10571 1320 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 TEX15Q9BXT5 2789 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 SPTBN1Q01082 2364 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 MYO9AB2RTY4 2548 aa5.12□□□□□ -1.59
CTNNA1-239ENST00000523685 NBPF19A0A087WUL8 3843 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 A6NL46 340 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 KCNK1O00180 336 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 KMOO15229 486 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 MATN3O15232 486 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 SCAF4O95104 1147 aaKnown RBP5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 CHEK2O96017 543 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 JCHAINP01591 159 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 MT-ND3P03897 115 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 EBLN1P0CF75 366 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 MYBL1P10243 752 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 FGF5P12034 268 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 GZMAP12544 262 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 FOLR1P15328 257 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 ZNF7P17097 686 aaPredicted RBP5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 XRCC1P18887 633 aaPredicted RBP5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 IDSP22304 550 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 CAPZBP47756 277 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 ARFIP2P53365 341 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 SUMO3P55854 103 aaPredicted RBP5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 RPS15P62841 145 aaKnown RBP5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 MXRA7P84157 204 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 PDE1BQ01064 536 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 SLC25A11Q02978 314 aaKnown RBP5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 RAPSNQ13702 412 aa5.11□□□□□ -1.59
CTNNA1-239ENST00000523685 GPR18Q14330 331 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms