RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 KIAA1191Q96A73 305 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ULK4Q96C45 1275 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ZFYVE21Q9BQ24 234 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 SARGQ9BW04 601 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 MRPL47Q9HD33 250 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 LUC7LQ9NQ29 371 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 IMPACTQ9P2X3 320 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 KLF13Q9Y2Y9 288 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ZNF407Q9C0G0 2248 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ARID1AO14497 2285 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 TUBAL3A6NHL2 446 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 FIGNL2A6NMB9 653 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 H0YGG7 62 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 KLRC4-KLRK1H3BQV0 150 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 SYT5O00445 386 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 DDX3XO00571 662 aaKnown RBP eCLIP10.36□□□□□ -0.753e-10■■■■□ 25.2
CTNNA1-234ENST00000522227 KCNAB3O43448 404 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 KDM1AO60341 852 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 S1PR4O95977 384 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 STATHP02808 62 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 EPXP11678 715 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 FERP16591 822 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 ITGALP20701 1170 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 CD9P21926 228 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 BMP5P22003 454 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC26A3P40879 764 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 ARF3P61204 181 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 XIAPP98170 497 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 PLGLB1Q02325 96 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 KRT31Q15323 416 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 HADHQ16836 314 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 HKDC1Q2TB90 917 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 CATSPEREQ5SY80 951 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 LRRC8BQ6P9F7 803 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 PAPD4Q6PIY7 484 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 RPS19BP1Q86WX3 136 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 MAPK1IP1LQ8NDC0 245 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 FAM71BQ8TC56 605 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 M1APQ8TC57 530 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC22A18Q96BI1 424 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 MRGPRX2Q96LB1 330 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 SMC6Q96SB8 1091 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 SECISBP2Q96T21 854 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 ZNF670Q9BS34 389 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 CNPPD1Q9BV87 410 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 TGIF2Q9GZN2 237 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 ZDHHC3Q9NYG2 299 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 C19orf25Q9UFG5 118 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 ANAPC7Q9UJX3 599 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 RUVBL1Q9Y265 456 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 PRSS21Q9Y6M0 314 aa10.36□□□□□ -0.75
CTNNA1-234ENST00000522227 KRT87PA6NCN2 255 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SOWAHDA6NJG2 315 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 C2orf81A6NN90 581 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 LIN7AO14910 233 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 CNOT4O95628 575 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 AGTP01019 485 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 TPM2P07951 284 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 PTPN3P26045 913 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 CD68P34810 354 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 PEX19P40855 299 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC14A2Q15849 920 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 EXT1Q16394 746 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 PRTGQ2VWP7 1150 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 KRTAP24-1Q3LI83 254 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 TEX44Q53QW1 395 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SFT2D3Q587I9 215 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 PPP1R2P3Q6NXS1 205 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 PAOXQ6QHF9 649 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 IRF2BP2Q7Z5L9 587 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SERPINA9Q86WD7 417 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 CSNK1A1LQ8N752 337 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 RELL2Q8NC24 303 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 C16orf52Q8NHV5 167 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 RNASE6Q93091 150 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 ZUFSPQ96AP4 578 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SPATA13Q96N96 652 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SH3GL2Q99962 352 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SYT11Q9BT88 431 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 MMP25Q9NPA2 562 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SMARCAL1Q9NZC9 954 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 IP6K2Q9UHH9 426 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC39A10Q9ULF5 831 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 LIPGQ9Y5X9 500 aa10.35□□□□□ -0.75
CTNNA1-234ENST00000522227 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 MBD3L4A6NDZ8 208 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 MBD3L5A6NJ08 208 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 TARM1B6A8C7 271 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 FOXS1O43638 330 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 CCDC172P0C7W6 258 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 EEF1GP26641 437 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 MC4RP32245 332 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 ASCL1P50553 236 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 NR1H2P55055 460 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 PPIAP62937 165 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 SNRPNP63162 240 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 DYNLT1P63172 113 aa10.34□□□□□ -0.75
CTNNA1-234ENST00000522227 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms