RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TMEM102Q8N9M5 508 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 C10orf90Q96M02 699 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 PCBD2Q9H0N5 130 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 SLC26A1Q9H2B4 701 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 TMEM184CQ9NVA4 438 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 NSMCE4AQ9NXX6 385 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 RUVBL1Q9Y265 456 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 MAU2Q9Y6X3 613 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 HAT1O14929 419 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 CEACAM4O75871 244 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 EZRP15311 586 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ZNF37AP17032 561 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 EMP3P54852 163 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 CAV1Q03135 178 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 CKAP4Q07065 602 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 MUM1Q2TAK8 710 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 HKDC1Q2TB90 917 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 PRMT9Q6P2P2 845 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ZDHHC24Q6UX98 284 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 C3orf62Q6ZUJ4 267 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ASB18Q6ZVZ8 466 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 PPP1R32Q7Z5V6 425 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 MRGPREQ86SM8 312 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 FBXO25Q8TCJ0 367 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ALKBH8Q96BT7 664 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 CABS1Q96KC9 395 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 IP6K3Q96PC2 410 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 SPSB2Q99619 263 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 SLC25A23Q9BV35 468 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 SGPP1Q9BX95 441 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 TRIM54Q9BYV2 358 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 RHOJQ9H4E5 214 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 WDR54Q9H977 334 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ZNF304Q9HCX3 659 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ARL15Q9NXU5 204 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 ANAPC2Q9UJX6 822 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 SH2B3Q9UQQ2 575 aa17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 PCDHGA9Q9Y5G4 932 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 TNRC6AQ8NDV7 1962 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-211ENST00000521700 TCRBV9S1A1TA0A576 114 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 URI1O94763 535 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 NPPBP16860 134 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 HRH2P25021 359 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 RRADP55042 308 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 AP1S2P56377 157 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 GPX6P59796 221 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 CSNK1G2P78368 415 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 SLC7A5Q01650 507 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 ZNF460Q14592 562 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 COLEC12Q5KU26 742 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 SBSNQ6UWP8 590 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 CYS1Q717R9 158 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 CEP97Q8IW35 865 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 ARHGEF39Q8N4T4 335 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 RERGQ96A58 199 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 COL26A1Q96A83 441 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 VPS39Q96JC1 886 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 TRIM4Q9C037 500 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 P4HTMQ9NXG6 502 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 CTSFQ9UBX1 484 aa17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 MTO1Q9Y2Z2 717 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-211ENST00000521700 A6NL46 340 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 VSTM2BA6NLU5 285 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 PEX12O00623 359 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 P2RX6O15547 441 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 GUCA1CO95843 209 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 C1QAP02745 245 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 GSTA2P09210 222 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 CCND1P24385 295 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 KLRB1Q12918 225 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 CAPN13Q6MZZ7 669 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 LCTLQ6UWM7 567 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 SHISA6Q6ZSJ9 500 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 C17orf64Q86WR6 236 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 NKAPQ8N5F7 415 aaKnown RBP17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 FDCSPQ8NFU4 85 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 OR56A3Q8NH54 315 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 ANKRD49Q8WVL7 239 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 CDKL2Q92772 493 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 PYCR2Q96C36 320 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 FBXL8Q96CD0 374 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 LRRC1Q9BTT6 524 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 PHACTR1Q9C0D0 580 aa17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 SOX17Q9H6I2 414 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 NOVA2Q9UNW9 492 aaKnown RBP17.03■□□□□ 0.32
TRAPPC9-211ENST00000521700 KCNE1BA0A087WTH5 132 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 FAM159BA6NKW6 160 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 CDC7O00311 574 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 TXNDC9O14530 226 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 MMP11P24347 488 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 CASRP41180 1078 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 MAGEA4P43358 317 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 PGDP52209 483 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 PPP1R3AQ16821 1122 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 GARNL3Q5VVW2 1013 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 VN1R4Q7Z5H5 301 aa17.02■□□□□ 0.32
TRAPPC9-211ENST00000521700 CCDC25Q86WR0 208 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms