RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GSDMDP57764 484 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 LINC01547P58512 204 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TUBB4BP68371 445 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRKCZQ05513 592 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 LGALS3BPQ08380 585 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TEFQ10587 303 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PTPRCAPQ14761 206 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TAF13Q15543 124 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 RABL6Q3YEC7 729 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TCP11X2Q5H9J9 407 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 ATL3Q6DD88 541 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 KRT80Q6KB66 452 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CORO6Q6QEF8 472 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 RBMS3Q6XE24 437 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 FAM228AQ86W67 206 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 NUDT13Q86X67 352 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 FOXP4Q8IVH2 680 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CEP57L1Q8IYX8 460 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TRIML1Q8N9V2 468 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 DRAXINQ8NBI3 349 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 KCTD6Q8NC69 237 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 OR5M8Q8NGP6 311 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 FCAMRQ8WWV6 532 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 HSD17B8Q92506 261 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF524Q96C55 264 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 SPDL1Q96EA4 605 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 FBXO17Q96EF6 278 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PGAP3Q96FM1 320 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CFAP57Q96MR6 1250 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 SFXN2Q96NB2 322 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PSD2Q9BQI7 771 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 GOLPH3LQ9H4A5 285 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 VIPAS39Q9H9C1 493 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 TBC1D17Q9HA65 648 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 PDRG1Q9NUG6 133 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 DDX19AQ9NUU7 478 aaKnown RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF701Q9NV72 531 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 OSER1Q9NX31 292 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 SPHK1Q9NYA1 384 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 FLRT3Q9NZU0 649 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 HMG20BQ9P0W2 317 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 B3GAT1Q9P2W7 334 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 CLIP2Q9UDT6 1046 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZDHHC2Q9UIJ5 367 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 USP16Q9Y5T5 823 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 NFAT5O94916 1531 aa3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 KDM6AO15550 1401 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P41-201ENST00000520234 RIMS1Q86UR5 1692 aaKnown RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYH8P13535 1937 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 RFX7Q2KHR2 1363 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 FLT1P17948 1338 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 NPHP3Q7Z494 1330 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 CDHR2Q9BYE9 1310 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 A0A087WYN8 130 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 PRR23AA6NEV1 266 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 CHUKO15111 745 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 TIMM44O43615 452 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 CIDEAO60543 219 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 WDPCPO95876 746 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 IGKV5-2P06315 115 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 PLA2G4BP0C869 781 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 MYBL1P10243 752 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ERVK-10P10266 1014 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 EFNA1P20827 205 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ITGA3P26006 1051 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ALDH1B1P30837 517 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 HOXC8P31273 242 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 PCGF2P35227 344 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 CSE1LP55060 971 aaKnown RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 RWDD2BP57060 319 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 SLC8A3P57103 927 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 EVCP57679 992 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 GCKRQ14397 625 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 RASA2Q15283 850 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 KYNUQ16719 465 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 LETM2Q2VYF4 491 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 KRTAP24-1Q3LI83 254 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 C1orf141Q5JVX7 400 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ARMC4Q5T2S8 1044 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 TTC19Q6DKK2 380 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF530Q6P9A1 599 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF790Q6PG37 636 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 C6orf89Q6UWU4 347 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 LEKR1Q6ZMV7 388 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 C11orf57Q6ZUT1 292 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ISCA2Q86U28 154 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 FAM114A1Q8IWE2 563 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZNF595Q8IYB9 648 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 TDRD5Q8NAT2 981 aaKnown RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 OR8K1Q8NGG5 319 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 OR1J1Q8NGS3 322 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 CTCFLQ8NI51 663 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 ZFAND2BQ8WV99 257 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 TEKT4Q8WW24 435 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 DHX58Q96C10 678 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 NXNL1Q96CM4 212 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 HDAC11Q96DB2 347 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 NSL1Q96IY1 281 aa3.01□□□□□ -1.93
HMGB1P41-201ENST00000520234 SERINC2Q96SA4 455 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms