RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 IP6K3Q96PC2 410 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ZFYVE21Q9BQ24 234 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ERP44Q9BS26 406 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 NUDT9Q9BW91 350 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 EPN3Q9H201 632 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 SLC26A1Q9H2B4 701 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 PARVBQ9HBI1 364 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ZNF304Q9HCX3 659 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 PPANQ9NQ55 473 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TMEM184CQ9NVA4 438 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 CUEDC1Q9NWM3 386 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ANKMY1Q9P2S6 941 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TRMT6Q9UJA5 497 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 MAU2Q9Y6X3 613 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 FAM187AA6NFU0 413 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 FOXS1O43638 330 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 NPPBP16860 134 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 FDXRP22570 491 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 RGS4P49798 205 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 EMP3P54852 163 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 RRADP55042 308 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 SOX8P57073 446 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 ETF1P62495 437 aaKnown RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 MGAT5Q09328 741 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 NAE1Q13564 534 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 TRADDQ15628 312 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 HIF1AQ16665 826 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PHKG1Q16816 387 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 DUPD1Q68J44 220 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 AGTRAPQ6RW13 159 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 SYT10Q6XYQ8 523 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 MAATS1Q7Z4T9 603 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PPP1R32Q7Z5V6 425 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 RAB43Q86YS6 212 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PLD3Q8IV08 490 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 METTL27Q8N6F8 245 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 GABPB2Q8TAK5 448 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 NACC2Q96BF6 587 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 FER1L6-AS2Q96M78 137 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 SPSB2Q99619 263 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 SMAD5Q99717 465 aaKnown RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 OLFM1Q99784 485 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 MCMBPQ9BTE3 642 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 IQCGQ9H095 443 aaKnown RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 ATG10Q9H0Y0 220 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 CXorf56Q9H5V9 222 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 ZNF552Q9H707 407 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 SMYD2Q9NRG4 433 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 ABCF3Q9NUQ8 709 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 P4HTMQ9NXG6 502 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 IKZF3Q9UKT9 509 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PADI2Q9Y2J8 665 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PCDHGB7Q9Y5F8 929 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PSAT1Q9Y617 370 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 PIEZO2Q9H5I5 2752 aa8.91□□□□□ -0.98
HDAC3-215ENST00000519474 TNRC6AQ8NDV7 1962 aaKnown RBP8.91□□□□□ -0.98
HDAC3-215ENST00000519474 HEATR5BQ9P2D3 2071 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 KCNE1BA0A087WTH5 132 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 AGPSO00116 658 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 PEX12O00623 359 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SOCS6O14544 535 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 RAD51CO43502 376 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 PIAS1O75925 651 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 C8GP07360 202 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MMP11P24347 488 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SSTR1P30872 391 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MLLT10P55197 1068 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 IL2P60568 153 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 CSNK1G2P78368 415 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 IRX1P78414 480 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-215ENST00000519474 FOXK1P85037 733 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 TMED1Q13445 227 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 NAA25Q14CX7 972 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MUM1Q2TAK8 710 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 HKDC1Q2TB90 917 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 NADK2Q4G0N4 442 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 VWA2Q5GFL6 755 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 DCAF10Q5QP82 559 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 THEMIS2Q5TEJ8 643 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 ATG9BQ674R7 924 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 LRRC8EQ6NSJ5 796 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 PRMT9Q6P2P2 845 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 KIRREL2Q6UWL6 708 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MBOAT1Q6ZNC8 495 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SHISA6Q6ZSJ9 500 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 CYS1Q717R9 158 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MRGPREQ86SM8 312 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 ZC3HC1Q86WB0 502 aaKnown RBP8.9□□□□□ -0.98
HDAC3-215ENST00000519474 PALM2Q8IXS6 379 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SHISA5Q8N114 240 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MYO1HQ8N1T3 1032 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 RBMXL3Q8N7X1 1067 aaKnown RBP8.9□□□□□ -0.98
HDAC3-215ENST00000519474 GOLGA6L1Q8N7Z2 621 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 BBOF1Q8ND07 529 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 VPS37AQ8NEZ2 397 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 STT3BQ8TCJ2 826 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 COL26A1Q96A83 441 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 FKBP10Q96AY3 582 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 TM4SF19Q96DZ7 209 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 LINGO1Q96FE5 620 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms